C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chondroitin sulfate synthase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032640 Chsy1 10090 + 7:66109515-66173789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036372 Chsy1-001 66109515-66173789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036372
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036372 7.272±4.69 2.211±0.91 2.031±0.07 2.613±0.94 3.238±0.62 1.425±0.37 1.125±0.12 1.711±0.07 1.539±1.34 5.143±0.42 0.292±0.07 10.164±3.23 5.597±4.01 0.394±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CN CIL_0007CN_0002 CGP 7:66079649-66173789

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002063 IMP chondrocyte development
GO:0005576 IEA extracellular region
GO:0009954 IMP proximal/distal pattern formation
GO:0016021 IEA integral component of membrane
GO:0016757 IMP transferase activity, transferring glycosyl groups
GO:0030206 IGI chondroitin sulfate biosynthetic process
GO:0030279 IEA negative regulation of ossification
GO:0031667 IEA response to nutrient levels
GO:0032580 IEA Golgi cisterna membrane
GO:0045880 IMP positive regulation of smoothened signaling pathway
GO:0046872 IEA metal ion binding
GO:0047238 IEA glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 IEA N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 IMP cartilage development
GO:0051923 IMP sulfation
GO:0060349 IMP bone morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079027 chsy1 chondroitin sulfate synthase 1 protein_coding Danio_rerio
ENSG00000131873 CHSY1 chondroitin sulfate synthase 1 protein_coding Homo_sapiens

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