Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	chondroitin sulfate synthase 1
ENSMUST00000036372	Chsy1-001	ENSMUSG00000032640	10090	+	7:66109515-66173789	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000036372	7.272±4.69	2.211±0.91	2.031±0.07	2.613±0.94	3.238±0.62	1.425±0.37	1.125±0.12	1.711±0.07	1.539±1.34	5.143±0.42	0.292±0.07	10.164±3.23	5.597±4.01	0.394±0.07

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007CN	CIL_0007CN_0002	CGP	7:66079649-66173789

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0002063	IMP	chondrocyte development
GO:0005576	IEA	extracellular region
GO:0009954	IMP	proximal/distal pattern formation
GO:0016021	IEA	integral component of membrane
GO:0016757	IMP	transferase activity, transferring glycosyl groups
GO:0030206	IGI	chondroitin sulfate biosynthetic process
GO:0030279	IEA	negative regulation of ossification
GO:0031667	IEA	response to nutrient levels
GO:0032580	IEA	Golgi cisterna membrane
GO:0045880	IMP	positive regulation of smoothened signaling pathway
GO:0046872	IEA	metal ion binding
GO:0047238	IEA	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510	IEA	N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216	IMP	cartilage development
GO:0051923	IMP	sulfation
GO:0060349	IMP	bone morphogenesis

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000254190	CHSY1-001	protein_coding	Homo_sapiens	0	3387
ENST00000543813	CHSY1-002	processed_transcript	Homo_sapiens	0	1964
ENST00000560766	CHSY1-005	processed_transcript	Homo_sapiens	0	429

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