C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2810474O19 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032712 2810474O19Rik 10090 + 6:149309414-149335663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046689 2810474O19Rik-001 149309428-149335663 protein_coding
  ENSMUST00000100765 2810474O19Rik-007 149309474-149334930 protein_coding
  ENSMUST00000127680 2810474O19Rik-003 149317334-149325967 protein_coding
  ENSMUST00000130664 2810474O19Rik-002 149309414-149326671 protein_coding
  ENSMUST00000137983 2810474O19Rik-004 149309573-149310455 retained_intron
  ENSMUST00000185930 2810474O19Rik-009 149309728-149325489 protein_coding
  ENSMUST00000187881 2810474O19Rik-010 149324656-149325773 protein_coding
  ENSMUST00000189837 2810474O19Rik-008 149325458-149335658 protein_coding
  ENSMUST00000189932 2810474O19Rik-006 149309474-149334930 protein_coding
  ENSMUST00000190785 2810474O19Rik-005 149309456-149328977 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046689ENSMUST00000100765ENSMUST00000130664ENSMUST00000137983ENSMUST00000189837ENSMUST00000190785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046689 5.590±4.83 1.456±0.25 3.639±0.22 1.955±0.06 1.608±0.67 1.361±0.45 0.591±0.30 0.984±0.42 1.778±1.16 6.332±1.37 0.266±0.08 7.251±2.67 2.102±0.62 0.110±0.00
ENSMUST00000100765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.03
ENSMUST00000130664 4.659±0.00 4.230±0.71 N/A N/A 2.764±1.07 1.837±0.81 1.077±0.15 1.121±0.10 1.097±0.54 4.370±1.04 N/A 6.352±2.39 N/A 0.410±0.13
ENSMUST00000137983 N/A N/A N/A N/A N/A N/A N/A N/A 1.069±0.19 N/A N/A N/A N/A N/A
ENSMUST00000189837 N/A N/A 1.405±0.07 0.718±0.15 2.063±0.00 1.359±0.00 N/A 1.340±0.00 0.964±0.35 N/A 0.180±0.07 7.998±1.69 3.513±1.80 0.514±0.04
ENSMUST00000190785 0.443±0.07 N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A N/A 0.318±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017G CIL_00017G_0002 CGP 6:149309414-149563329

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174718 KIAA1551 KIAA1551 protein_coding Homo_sapiens

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