C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2810474O19 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189837 2810474O19Rik-008 ENSMUSG00000032712 10090 + 6:149325458-149335658 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000189837
Transcript ID Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000189837 1.405±0.07 0.718±0.15 2.063±0.00 1.359±0.00 1.340±0.00 0.964±0.35 0.180±0.07 7.998±1.69 3.513±1.80 0.514±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017G CIL_00017G_0002 CGP 6:149309414-149563329

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312561 KIAA1551-001 protein_coding Homo_sapiens 0 261
ENST00000397578 KIAA1551-007 processed_transcript Homo_sapiens 0 191
ENST00000535596 KIAA1551-006 processed_transcript Homo_sapiens 0 191
ENST00000543763 KIAA1551-003 retained_intron Homo_sapiens 0 202

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