C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174718-ENSG00000151746 CGP 9606 12:31959370-32383633
GeneTranscriptPositionBiotype
ENSG00000151746 (BICD1)
bicaudal D homolog 1 (Drosophila) 		ENST00000281474 (BICD1-002) 32107229-32377877 protein_coding
ENST00000395758 (BICD1-003) 32107252-32377923 nonsense_mediated_decay
ENST00000547680 (BICD1-008) 32328402-32333065 protein_coding
ENST00000548411 (BICD1-001) 32107151-32383633 protein_coding
ENST00000550207 (BICD1-007) 32106885-32108329 protein_coding
ENST00000551086 (BICD1-006) 32107296-32108806 protein_coding
ENST00000551848 (BICD1-005) 32106835-32108796 protein_coding
ENST00000552160 (BICD1-004) 32334517-32338930 protein_coding
ENST00000552226 (BICD1-009) 32337499-32339120 retained_intron
ENST00000614004 (BICD1-010) 32367534-32368062 retained_intron
ENSG00000174718 (KIAA1551)
KIAA1551 		ENST00000312561 (KIAA1551-001) 31959419-31993107 protein_coding
ENST00000381054 (KIAA1551-002) 31962489-31982979 protein_coding
ENST00000397578 (KIAA1551-007) 31959449-31992969 processed_transcript
ENST00000535596 (KIAA1551-006) 31959438-31992941 processed_transcript
ENST00000535606 (KIAA1551-008) 31959663-31970246 processed_transcript
ENST00000540924 (KIAA1551-005) 31959408-31981060 protein_coding
ENST00000541981 (KIAA1551-004) 31959370-31992834 processed_transcript
ENST00000543763 (KIAA1551-003) 31987166-31993103 retained_intron
ENSG00000257094 (RP11-50I19.1)
 ENST00000534895 (RP11-50I19.1-001) 32007127-32007435 processed_pseudogene
ENSG00000257852 (RP11-843B15.1)
 ENST00000547280 (RP11-843B15.1-001) 32072734-32072880 processed_pseudogene
ENSG00000258134 (RP11-956A19.1)
 ENST00000549976 (RP11-956A19.1-001) 32227410-32228154 processed_pseudogene
ENSG00000274964 (RP11-817I4.1)
 ENST00000622688 (RP11-817I4.1-001) 32339368-32340724 sense_intronic
ENSG00000276115 (RP11-817I4.2)
 ENST00000614539 (RP11-817I4.2-001) 32352349-32354144 sense_intronic
ENSG00000276136 (RP11-50I19.2)
 ENST00000616998 (RP11-50I19.2-001) 32000375-32001222 lincRNA
ENSG00000277342 (RP11-843B15.4)
 ENST00000619744 (RP11-843B15.4-001) 32109076-32109602 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_00017G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032712-ENSMUSG00000003452 CGP 10090 6:149309414-149563329
GeneTranscriptPositionBiotype
ENSMUSG00000003452 (Bicd1)
bicaudal D homolog 1 (Drosophila) 		ENSMUST00000003544 (Bicd1-002) 149409429-149556731 protein_coding
ENSMUST00000086829 (Bicd1-001) 149408984-149563329 protein_coding
ENSMUST00000111513 (Bicd1-003) 149409016-149557819 protein_coding
ENSMUST00000130270 (Bicd1-004) 149409069-149497771 retained_intron
ENSMUST00000140759 (Bicd1-005) 149549723-149558857 retained_intron
ENSMUST00000172926 (Bicd1-008) 149516936-149520436 protein_coding
ENSMUST00000173408 (Bicd1-007) 149409429-149556731 nonsense_mediated_decay
ENSMUST00000174886 (Bicd1-006) 149513830-149519313 retained_intron
ENSMUSG00000032712 (2810474O19Rik)
RIKEN cDNA 2810474O19 gene 		ENSMUST00000046689 (2810474O19Rik-001) 149309428-149335663 protein_coding
ENSMUST00000100765 (2810474O19Rik-007) 149309474-149334930 protein_coding
ENSMUST00000127680 (2810474O19Rik-003) 149317334-149325967 protein_coding
ENSMUST00000130664 (2810474O19Rik-002) 149309414-149326671 protein_coding
ENSMUST00000137983 (2810474O19Rik-004) 149309573-149310455 retained_intron
ENSMUST00000185930 (2810474O19Rik-009) 149309728-149325489 protein_coding
ENSMUST00000187881 (2810474O19Rik-010) 149324656-149325773 protein_coding
ENSMUST00000189837 (2810474O19Rik-008) 149325458-149335658 protein_coding
ENSMUST00000189932 (2810474O19Rik-006) 149309474-149334930 protein_coding
ENSMUST00000190785 (2810474O19Rik-005) 149309456-149328977 protein_coding
ENSMUSG00000081126 (Gm15784)
predicted gene 15784 		ENSMUST00000120260 (Gm15784-001) 149361686-149363147 processed_pseudogene
ENSMUSG00000081335 (Gm15786)
predicted gene 15786 		ENSMUST00000121079 (Gm15786-001) 149401793-149402242 processed_pseudogene
ENSMUSG00000082072 (Gm15785)
predicted gene 15785 		ENSMUST00000119145 (Gm15785-001) 149433780-149434473 processed_pseudogene
ENSMUSG00000083351 (Gm15783)
predicted gene 15783 		ENSMUST00000117521 (Gm15783-001) 149405822-149406685 processed_pseudogene
ENSMUSG00000084083 (Gm15782)
predicted gene 15782 		ENSMUST00000121073 (Gm15782-001) 149353382-149353826 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017G_0001ENSG00000151746ENST00000281474ENST00000395758ENST00000548411ENST00000550207ENST00000551848ENST00000552160ENSG00000174718ENST00000312561ENST00000381054ENST00000397578ENST00000543763ENSG00000257094ENST00000534895ENSG00000257852ENST00000547280ENSG00000258134ENST00000549976ENSG00000274964ENST00000622688ENSG00000276115ENST00000614539ENSG00000276136ENST00000616998ENSG00000277342ENST00000619744CIL_00017G_0002ENSMUSG00000003452ENSMUST00000003544ENSMUST00000086829ENSMUST00000111513ENSMUST00000130270ENSMUST00000140759ENSMUST00000172926ENSMUST00000173408ENSMUST00000174886ENSMUSG00000032712ENSMUST00000046689ENSMUST00000100765ENSMUST00000130664ENSMUST00000137983ENSMUST00000189837ENSMUST00000190785ENSMUSG00000081126ENSMUST00000120260ENSMUSG00000081335ENSMUST00000121079ENSMUSG00000082072ENSMUST00000119145ENSMUSG00000083351ENSMUST00000117521ENSMUSG00000084083ENSMUST00000121073
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151746 ENST00000281474 N/A 0.847±0.00 N/A N/A 0.885±0.00 N/A 0.403±0.00 N/A N/A 0.707±0.00 N/A 3.581±0.00 0.431±0.00 0.706±0.29
ENST00000395758 0.299±0.00 N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A 0.355±0.00 1.822±0.00 2.883±0.00 N/A
ENST00000547680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548411 0.247±0.00 0.436±0.00 0.401±0.00 2.730±0.14 0.561±0.00 0.315±0.00 0.179±0.01 N/A 0.307±0.28 0.694±0.33 0.261±0.06 1.373±0.70 0.482±0.10 0.395±0.14
ENST00000550207 N/A N/A 1.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.448±0.00 N/A N/A
ENST00000551086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551848 N/A 1.116±0.00 N/A N/A N/A N/A N/A N/A 0.081±0.00 0.843±0.00 N/A 2.258±0.00 1.012±0.00 1.067±0.00
ENST00000552160 N/A N/A N/A N/A 1.565±0.00 1.024±0.00 N/A N/A 0.071±0.00 1.825±0.00 0.367±0.04 N/A N/A N/A
ENST00000552226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174718 ENST00000312561 2.077±0.00 10.416±0.00 2.182±0.00 1.322±0.27 4.059±2.49 4.303±0.00 0.581±0.16 2.739±0.63 1.612±0.61 5.073±2.82 0.944±0.00 11.367±1.50 1.835±0.67 2.446±0.31
ENST00000381054 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.050±0.00 N/A N/A N/A N/A
ENST00000397578 N/A N/A N/A N/A N/A N/A N/A N/A 6.084±0.00 N/A N/A N/A N/A N/A
ENST00000535596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543763 N/A 14.151±0.00 N/A 1.447±0.00 N/A 2.351±0.00 N/A 4.486±0.00 5.791±0.00 N/A N/A 19.249±0.00 4.139±0.69 5.780±0.00
ENSG00000257094 ENST00000534895 0.071±0.00 N/A N/A N/A 0.169±0.00 0.225±0.00 0.471±0.00 N/A N/A N/A N/A 0.219±0.00 N/A N/A
ENSG00000257852 ENST00000547280 N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258134 ENST00000549976 N/A 0.364±0.00 0.696±0.00 0.097±0.00 0.302±0.00 N/A 0.078±0.00 N/A 0.514±0.00 0.544±0.00 N/A 0.180±0.09 N/A 0.133±0.03
ENSG00000274964 ENST00000622688 0.395±0.00 0.225±0.00 0.052±0.00 0.329±0.07 0.292±0.00 0.134±0.00 0.194±0.13 0.120±0.08 0.054±0.00 0.153±0.00 N/A 0.418±0.00 0.626±0.20 0.282±0.13
ENSG00000276115 ENST00000614539 0.166±0.00 0.821±0.00 0.201±0.00 0.470±0.10 0.493±0.18 0.203±0.11 0.093±0.03 0.255±0.00 0.240±0.23 0.473±0.31 N/A 0.519±0.21 0.180±0.14 0.178±0.00
ENSG00000276136 ENST00000616998 0.409±0.00 4.424±0.00 0.119±0.00 0.372±0.00 0.345±0.25 0.239±0.00 0.253±0.00 1.161±0.67 0.502±0.27 0.500±0.00 0.086±0.00 1.973±1.29 0.956±0.25 0.436±0.19
ENSG00000277342 ENST00000619744 0.017±0.00 0.107±0.00 0.142±0.00 0.119±0.00 0.288±0.12 0.571±0.53 0.507±0.48 0.236±0.00 0.867±0.85 1.289±1.03 N/A 0.993±1.06 0.352±0.00 0.132±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003452 ENSMUST00000003544 N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.06
ENSMUST00000086829 0.251±0.29 0.348±0.13 0.300±0.08 3.259±0.92 0.057±0.00 0.338±0.10 0.164±0.09 0.342±0.13 0.056±0.02 0.303±0.10 0.031±0.01 2.015±0.70 0.060±0.02 0.040±0.00
ENSMUST00000111513 0.214±0.20 0.782±0.00 N/A N/A 0.358±0.20 0.570±0.05 0.190±0.10 0.395±0.23 0.051±0.03 0.418±0.16 0.012±0.00 1.645±0.38 0.068±0.00 0.113±0.00
ENSMUST00000130270 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.02 N/A N/A 2.175±0.00 N/A 0.113±0.03
ENSMUST00000140759 N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A 0.025±0.00 N/A N/A N/A
ENSMUST00000172926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.684±0.00 1.063±0.42 1.180±0.00
ENSMUST00000173408 N/A N/A N/A 6.525±0.00 N/A N/A N/A N/A N/A N/A 0.025±0.00 4.491±0.00 0.626±0.43 0.233±0.00
ENSMUST00000174886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.948±0.00
ENSMUSG00000032712 ENSMUST00000046689 5.590±4.83 1.456±0.25 3.639±0.22 1.955±0.06 1.608±0.67 1.361±0.45 0.591±0.30 0.984±0.42 1.778±1.16 6.332±1.37 0.266±0.08 7.251±2.67 2.102±0.62 0.110±0.00
ENSMUST00000100765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.03
ENSMUST00000127680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130664 4.659±0.00 4.230±0.71 N/A N/A 2.764±1.07 1.837±0.81 1.077±0.15 1.121±0.10 1.097±0.54 4.370±1.04 N/A 6.352±2.39 N/A 0.410±0.13
ENSMUST00000137983 N/A N/A N/A N/A N/A N/A N/A N/A 1.069±0.19 N/A N/A N/A N/A N/A
ENSMUST00000185930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189837 N/A N/A 1.405±0.07 0.718±0.15 2.063±0.00 1.359±0.00 N/A 1.340±0.00 0.964±0.35 N/A 0.180±0.07 7.998±1.69 3.513±1.80 0.514±0.04
ENSMUST00000189932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190785 0.443±0.07 N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A N/A 0.318±0.12
ENSMUSG00000081126 ENSMUST00000120260 0.788±0.19 0.289±0.11 0.325±0.10 0.536±0.39 0.297±0.12 1.041±0.46 0.284±0.10 0.581±0.06 0.302±0.27 0.550±0.14 0.098±0.07 0.688±0.42 0.319±0.18 10.859±4.52
ENSMUSG00000081335 ENSMUST00000121079 N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.107±0.00 N/A
ENSMUSG00000082072 ENSMUST00000119145 N/A N/A 0.030±0.00 0.482±0.05 0.095±0.00 N/A 0.113±0.04 0.415±0.00 0.026±0.01 N/A 0.079±0.00 0.472±0.37 0.049±0.01 N/A
ENSMUSG00000083351 ENSMUST00000117521 N/A N/A N/A 0.030±0.01 N/A N/A N/A N/A N/A N/A N/A 0.428±0.00 0.010±0.00 N/A
ENSMUSG00000084083 ENSMUST00000121073 N/A N/A 0.062±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.609±0.60

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