C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lipoxygenase homology domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032818 Loxhd1 10090 + 18:77281958-77442341 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035501 Loxhd1-001 77307750-77382328 protein_coding
  ENSMUST00000096547 Loxhd1-201 77281958-77442257 protein_coding
  ENSMUST00000123166 Loxhd1-004 77408702-77441886 protein_coding
  ENSMUST00000123410 Loxhd1-003 77375065-77442341 protein_coding
  ENSMUST00000148341 Loxhd1-002 77332394-77410665 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035501ENSMUST00000096547ENSMUST00000123166ENSMUST00000123410ENSMUST00000148341
Transcript ID Adipose Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035501 N/A 0.032±0.02 0.070±0.06 0.014±0.00 0.012±0.01 0.021±0.00 N/A 0.127±0.08 0.014±0.00 0.359±0.00
ENSMUST00000096547 0.004±0.00 0.005±0.00 0.020±0.01 N/A 0.002±0.00 N/A N/A 0.074±0.05 0.002±0.00 0.432±0.00
ENSMUST00000123166 N/A N/A N/A 0.023±0.00 N/A N/A N/A 0.213±0.06 0.008±0.00 N/A
ENSMUST00000123410 N/A N/A 0.025±0.00 N/A N/A N/A 0.012±0.00 0.059±0.03 0.011±0.00 N/A
ENSMUST00000148341 N/A 0.007±0.00 0.049±0.01 N/A 0.002±0.00 N/A N/A 0.141±0.07 0.002±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P7 CIL_0001P7_0002 CGP 18:77185853-77442341

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005262 IBA calcium channel activity
GO:0007605 IMP sensory perception of sound
GO:0016020 IBA membrane
GO:0032420 IDA stereocilium
GO:0050982 IBA detection of mechanical stimulus
GO:0070588 IBA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074638 loxhd1b lipoxygenase homology domains 1b protein_coding Danio_rerio
ENSDARG00000094738 loxhd1a lipoxygenase homology domains 1a protein_coding Danio_rerio
ENSG00000167210 LOXHD1 lipoxygenase homology domains 1 protein_coding Homo_sapiens

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