C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032842 Abcc10 10090 - 17:46303221-46328352 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047970 Abcc10-002 46303233-46327979 protein_coding
  ENSMUST00000095261 Abcc10-005 46303421-46325766 protein_coding
  ENSMUST00000165733 Abcc10-004 46322858-46327997 retained_intron
  ENSMUST00000167360 Abcc10-001 46303221-46328023 protein_coding
  ENSMUST00000168490 Abcc10-007 46313662-46323632 protein_coding
  ENSMUST00000170168 Abcc10-006 46324557-46328352 processed_transcript
  ENSMUST00000171584 Abcc10-003 46303230-46327976 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047970ENSMUST00000095261ENSMUST00000165733ENSMUST00000167360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047970 N/A 5.145±2.45 N/A N/A 1.540±0.02 3.925±0.78 0.907±0.39 0.884±0.00 0.786±0.40 1.294±0.24 N/A 2.569±1.53 0.673±0.39 0.713±0.00
ENSMUST00000095261 N/A N/A N/A 0.558±0.00 N/A N/A N/A N/A N/A N/A N/A 0.412±0.00 0.087±0.00 N/A
ENSMUST00000165733 N/A N/A N/A N/A N/A N/A 0.731±0.03 N/A N/A N/A 0.360±0.17 N/A 0.438±0.00 N/A
ENSMUST00000167360 4.132±0.45 7.362±3.15 7.535±2.50 4.146±1.67 6.272±2.77 15.007±2.12 1.201±0.47 6.916±1.82 2.975±1.79 4.023±0.38 0.494±0.22 5.334±2.75 2.627±1.33 2.682±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_0006UQ CIL_0006UQ_0002 CGP 17:46257851-46303271

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005765 IEA lysosomal membrane
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000124574 ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 protein_coding Homo_sapiens

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