C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047970 Abcc10-002 ENSMUSG00000032842 10090 - 17:46303233-46327979 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000047970
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000047970 5.145±2.45 1.540±0.02 3.925±0.78 0.907±0.39 0.884±0.00 0.786±0.40 1.294±0.24 2.569±1.53 0.673±0.39 0.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_0006UQ CIL_0006UQ_0002 CGP 17:46257851-46303271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244533 ABCC10-007 protein_coding Homo_sapiens 0 2327
ENST00000372515 ABCC10-009 protein_coding Homo_sapiens 0 1051
ENST00000372530 ABCC10-002 protein_coding Homo_sapiens 0 4180
ENST00000437104 ABCC10-010 retained_intron Homo_sapiens 0 377
ENST00000443426 ABCC10-004 processed_transcript Homo_sapiens 0 422
ENST00000463024 ABCC10-003 retained_intron Homo_sapiens 0 1578
ENST00000469856 ABCC10-005 retained_intron Homo_sapiens 0 237
ENST00000502549 ABCC10-008 processed_transcript Homo_sapiens 0 209
ENST00000505344 ABCC10-011 protein_coding Homo_sapiens 0 340

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