C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167360 Abcc10-001 ENSMUSG00000032842 10090 - 17:46303221-46328023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167360 4.132±0.45 7.362±3.15 7.535±2.50 4.146±1.67 6.272±2.77 15.007±2.12 1.201±0.47 6.916±1.82 2.975±1.79 4.023±0.38 0.494±0.22 5.334±2.75 2.627±1.33 2.682±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_0006UQ CIL_0006UQ_0002 CGP 17:46257851-46303271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005765 IEA lysosomal membrane
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244533 ABCC10-007 protein_coding Homo_sapiens 0 2728
ENST00000372515 ABCC10-009 protein_coding Homo_sapiens 0 1051
ENST00000372530 ABCC10-002 protein_coding Homo_sapiens 0 4582
ENST00000437104 ABCC10-010 retained_intron Homo_sapiens 0 377
ENST00000443426 ABCC10-004 processed_transcript Homo_sapiens 0 422
ENST00000463024 ABCC10-003 retained_intron Homo_sapiens 0 1978
ENST00000469856 ABCC10-005 retained_intron Homo_sapiens 0 237
ENST00000502549 ABCC10-008 processed_transcript Homo_sapiens 0 209
ENST00000505344 ABCC10-011 protein_coding Homo_sapiens 0 340

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