C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transcription factor-Y gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134979 Nfyc-006 ENSMUSG00000032897 10090 - 4:120765257-120825684 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 ISO nucleus
GO:0005667 IC transcription factor complex
GO:0016602 IEA CCAAT-binding factor complex
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308733 NFYC-007 protein_coding Homo_sapiens 0 560
ENST00000372651 NFYC-006 protein_coding Homo_sapiens 0 560
ENST00000372652 NFYC-004 protein_coding Homo_sapiens 0 560
ENST00000372653 NFYC-003 protein_coding Homo_sapiens 0 403
ENST00000372654 NFYC-005 protein_coding Homo_sapiens 0 560
ENST00000372669 NFYC-012 protein_coding Homo_sapiens 0 560
ENST00000414185 NFYC-016 protein_coding Homo_sapiens 0 466
ENST00000416859 NFYC-025 protein_coding Homo_sapiens 0 348
ENST00000424419 NFYC-018 retained_intron Homo_sapiens 0 411
ENST00000425457 NFYC-015 protein_coding Homo_sapiens 0 560
ENST00000427410 NFYC-002 protein_coding Homo_sapiens 0 560
ENST00000437925 RP11-276H19.4-001 processed_pseudogene Homo_sapiens 0 448
ENST00000440226 NFYC-011 protein_coding Homo_sapiens 0 560
ENST00000447388 NFYC-001 protein_coding Homo_sapiens 0 560
ENST00000453631 NFYC-010 protein_coding Homo_sapiens 4e-35 152
ENST00000456393 NFYC-017 protein_coding Homo_sapiens 0 560
ENST00000467203 NFYC-013 retained_intron Homo_sapiens 0 396
ENST00000525290 NFYC-022 protein_coding Homo_sapiens 2.94273e-44 182
ENST00000525349 NFYC-023 retained_intron Homo_sapiens 0 414
ENST00000530965 NFYC-024 protein_coding Homo_sapiens 2e-20 102
ENST00000620728 NFYC-201 protein_coding Homo_sapiens 0 560

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