C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 54
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033055 Ankrd54 10090 - 15:79053094-79062893 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040676 Ankrd54-001 79053094-79062885 protein_coding
  ENSMUST00000125523 Ankrd54-007 79053768-79055344 protein_coding
  ENSMUST00000128631 Ankrd54-003 79059621-79062893 retained_intron
  ENSMUST00000133541 Ankrd54-002 79053104-79062885 retained_intron
  ENSMUST00000151889 Ankrd54-004 79055386-79062882 protein_coding
  ENSMUST00000153003 Ankrd54-005 79055415-79062836 nonsense_mediated_decay
  ENSMUST00000156411 Ankrd54-006 79053574-79055413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040676ENSMUST00000133541ENSMUST00000156411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040676 7.152±1.99 17.921±3.02 7.540±1.38 12.333±1.95 12.367±4.48 12.500±2.28 2.151±0.73 10.048±2.81 12.719±9.84 12.100±4.14 1.671±0.42 18.126±6.76 19.596±4.29 108.428±22.45
ENSMUST00000133541 1.562±0.14 N/A 1.164±0.00 2.773±0.00 2.739±0.44 2.254±0.04 0.877±0.04 1.813±0.49 4.486±2.08 1.961±0.12 0.189±0.03 2.126±0.71 2.060±0.22 N/A
ENSMUST00000156411 N/A N/A N/A N/A N/A 7.512±0.00 N/A N/A 2.889±0.02 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0003QH CIL_0003QH_0002 CGP 15:79053094-79094400

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006913 IDA nucleocytoplasmic transport
GO:0019887 IDA protein kinase regulator activity
GO:0030496 IDA midbody
GO:0032403 IPI protein complex binding
GO:0045648 IDA positive regulation of erythrocyte differentiation
GO:0045859 IDA regulation of protein kinase activity
GO:1902531 IDA regulation of intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055743 ankrd54 ankyrin repeat domain 54 protein_coding Danio_rerio
ENSG00000100124 ANKRD54 ankyrin repeat domain 54 protein_coding Homo_sapiens

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