C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040676 Ankrd54-001 ENSMUSG00000033055 10090 - 15:79053094-79062885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040676
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040676 7.152±1.99 17.921±3.02 7.540±1.38 12.333±1.95 12.367±4.48 12.500±2.28 2.151±0.73 10.048±2.81 12.719±9.84 12.100±4.14 1.671±0.42 18.126±6.76 19.596±4.29 108.428±22.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0003QH CIL_0003QH_0002 CGP 15:79053094-79094400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006913 IDA nucleocytoplasmic transport
GO:0019887 IDA protein kinase regulator activity
GO:0030496 IDA midbody
GO:0032403 IPI protein complex binding
GO:0045648 IDA positive regulation of erythrocyte differentiation
GO:0045859 IDA regulation of protein kinase activity
GO:1902531 IDA regulation of intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215941 ANKRD54-001 protein_coding Homo_sapiens 0 1122
ENST00000406423 ANKRD54-010 protein_coding Homo_sapiens 0 719
ENST00000411961 ANKRD54-004 protein_coding Homo_sapiens 0 686
ENST00000413497 ANKRD54-008 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000433115 ANKRD54P1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000434930 ANKRD54-005 protein_coding Homo_sapiens 0 706
ENST00000458278 ANKRD54-006 protein_coding Homo_sapiens 0 645
ENST00000464849 ANKRD54-009 processed_transcript Homo_sapiens 0 525
ENST00000498417 ANKRD54-002 processed_transcript Homo_sapiens 0 422
ENST00000609454 ANKRD54-013 protein_coding Homo_sapiens 0 268

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