C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033099 Nol12 10090 + 15:78934933-78943634 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041164 Nol12-004 78934995-78940864 protein_coding
  ENSMUST00000123013 Nol12-003 78935208-78936581 protein_coding
  ENSMUST00000138880 Nol12-001 78934933-78943634 protein_coding
  ENSMUST00000145157 Nol12-002 78935186-78937824 protein_coding
  ENSMUST00000149580 Nol12-005 78934951-78940932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041164ENSMUST00000123013ENSMUST00000138880ENSMUST00000145157ENSMUST00000149580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041164 8.274±1.52 6.147±1.47 5.902±0.00 10.458±3.28 7.923±0.77 6.118±1.63 3.293±1.01 5.822±0.82 5.702±3.09 3.167±0.29 7.904±1.07 9.424±3.87 20.410±9.72 6.767±0.96
ENSMUST00000123013 N/A 4.803±0.00 N/A N/A 5.835±2.52 5.068±0.00 2.341±0.00 4.066±0.77 1.925±0.00 4.110±0.05 N/A 12.673±0.00 9.790±2.82 15.462±15.02
ENSMUST00000138880 2.135±0.48 2.176±0.48 0.706±0.00 2.296±0.82 1.725±0.89 2.284±0.59 0.778±0.18 1.444±0.47 1.537±1.21 1.034±0.37 0.751±0.05 2.763±1.76 1.660±0.76 N/A
ENSMUST00000145157 N/A 6.821±1.09 N/A 6.683±1.46 N/A 4.648±0.00 N/A 3.122±0.15 2.435±0.28 2.630±0.24 N/A 7.813±3.91 11.117±1.73 9.017±5.12
ENSMUST00000149580 N/A N/A 5.321±0.89 12.621±7.04 1.849±0.00 N/A N/A N/A 11.282±6.47 N/A 5.280±1.08 15.606±4.58 16.813±4.00 12.856±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_00040C CIL_00040C_0002 CGP 15:78926725-78943634
CIL_00040B CIL_00040B_0002 CGP 15:78934933-79005867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0008150 ND biological_process
GO:0019843 ISA rRNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038027 nol12 nucleolar protein 12 protein_coding Danio_rerio
ENSG00000100101 RP1-37E16.12 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477208} protein_coding Homo_sapiens
ENSG00000273899 NOL12 nucleolar protein 12 protein_coding Homo_sapiens

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