C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00040B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100101-ENSG00000100106 CGP 9606 22:37686414-37776556
GeneTranscriptPositionBiotype
ENSG00000100101 (RP1-37E16.12)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477208} 		ENST00000455236 (RP1-37E16.12-001) 37686414-37774130 nonsense_mediated_decay
ENSG00000273899 (NOL12)
nucleolar protein 12 		ENST00000359114 (NOL12-001) 37686323-37693478 protein_coding
ENST00000438329 (NOL12-002) 37686323-37693476 nonsense_mediated_decay
ENST00000468597 (NOL12-006) 37686346-37690900 retained_intron
ENST00000474032 (NOL12-004) 37686343-37688299 retained_intron
ENST00000484650 (NOL12-005) 37687785-37691465 retained_intron
ENST00000493862 (NOL12-003) 37681673-37693475 processed_transcript
ENST00000611699 (NOL12-201) 37686360-37693471 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00040B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033099-ENSMUSG00000033088 CGP 10090 15:78934933-79005867
GeneTranscriptPositionBiotype
ENSMUSG00000033088 (Triobp)
TRIO and F-actin binding protein 		ENSMUST00000109687 (Triobp-005) 78983041-79005864 protein_coding
ENSMUST00000109688 (Triobp-201) 78983056-79005862 protein_coding
ENSMUST00000109689 (Triobp-002) 78947724-79005867 protein_coding
ENSMUST00000109690 (Triobp-001) 78947724-79005565 protein_coding
ENSMUST00000129922 (Triobp-008) 79002182-79004697 processed_transcript
ENSMUST00000130663 (Triobp-007) 78983077-78994859 protein_coding
ENSMUST00000137934 (Triobp-004) 78948245-78953255 retained_intron
ENSMUST00000140228 (Triobp-003) 78947724-78968842 processed_transcript
ENSMUST00000144151 (Triobp-006) 78983705-78991438 protein_coding
ENSMUSG00000033099 (Nol12)
nucleolar protein 12 		ENSMUST00000041164 (Nol12-004) 78934995-78940864 protein_coding
ENSMUST00000123013 (Nol12-003) 78935208-78936581 protein_coding
ENSMUST00000138880 (Nol12-001) 78934933-78943634 protein_coding
ENSMUST00000145157 (Nol12-002) 78935186-78937824 protein_coding
ENSMUST00000149580 (Nol12-005) 78934951-78940932 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040B_0001ENSG00000100101ENST00000455236ENSG00000273899ENST00000359114ENST00000438329ENST00000468597ENST00000474032ENST00000484650ENST00000493862ENST00000611699CIL_00040B_0002ENSMUSG00000033088ENSMUST00000109687ENSMUST00000109688ENSMUST00000109689ENSMUST00000109690ENSMUST00000129922ENSMUST00000130663ENSMUST00000137934ENSMUST00000140228ENSMUST00000144151ENSMUSG00000033099ENSMUST00000041164ENSMUST00000123013ENSMUST00000138880ENSMUST00000145157ENSMUST00000149580
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040B_0001ENSG00000100101ENST00000455236ENSG00000273899ENST00000359114ENST00000484650ENST00000493862ENST00000611699CIL_00040B_0002ENSMUSG00000033088ENSMUST00000109687ENSMUST00000109688ENSMUST00000109689ENSMUST00000109690ENSMUST00000129922ENSMUSG00000033099ENSMUST00000041164ENSMUST00000123013ENSMUST00000138880ENSMUST00000145157ENSMUST00000149580
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100101 ENST00000455236 N/A N/A 0.264±0.00 N/A N/A N/A 0.236±0.00 N/A N/A N/A 0.645±0.00 N/A N/A N/A
ENSG00000273899 ENST00000359114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.881±0.00 N/A N/A
ENST00000438329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.464±0.00 N/A N/A N/A
ENST00000493862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.714±0.00
ENST00000611699 N/A N/A N/A 5.078±2.87 N/A N/A N/A N/A 5.882±0.00 2.863±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033088 ENSMUST00000109687 12.544±4.59 N/A 4.808±0.86 N/A 22.751±6.47 10.373±0.92 4.199±0.00 5.392±0.00 3.767±2.07 8.701±1.12 N/A 31.371±0.00 5.609±0.00 N/A
ENSMUST00000109688 26.519±7.82 54.794±5.29 18.730±0.09 8.000±4.85 23.906±11.93 26.160±5.27 8.425±1.35 18.166±2.97 11.672±4.07 15.910±1.91 9.339±1.33 37.311±16.67 32.656±9.70 9.187±3.86
ENSMUST00000109689 N/A N/A N/A 2.749±1.79 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109690 N/A N/A N/A 4.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129922 N/A N/A N/A 5.399±0.00 N/A N/A N/A N/A N/A N/A N/A 70.366±0.00 88.036±1.79 15.745±0.00
ENSMUST00000130663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033099 ENSMUST00000041164 8.274±1.52 6.147±1.47 5.902±0.00 10.458±3.28 7.923±0.77 6.118±1.63 3.293±1.01 5.822±0.82 5.702±3.09 3.167±0.29 7.904±1.07 9.424±3.87 20.410±9.72 6.767±0.96
ENSMUST00000123013 N/A 4.803±0.00 N/A N/A 5.835±2.52 5.068±0.00 2.341±0.00 4.066±0.77 1.925±0.00 4.110±0.05 N/A 12.673±0.00 9.790±2.82 15.462±15.02
ENSMUST00000138880 2.135±0.48 2.176±0.48 0.706±0.00 2.296±0.82 1.725±0.89 2.284±0.59 0.778±0.18 1.444±0.47 1.537±1.21 1.034±0.37 0.751±0.05 2.763±1.76 1.660±0.76 N/A
ENSMUST00000145157 N/A 6.821±1.09 N/A 6.683±1.46 N/A 4.648±0.00 N/A 3.122±0.15 2.435±0.28 2.630±0.24 N/A 7.813±3.91 11.117±1.73 9.017±5.12
ENSMUST00000149580 N/A N/A 5.321±0.89 12.621±7.04 1.849±0.00 N/A N/A N/A 11.282±6.47 N/A 5.280±1.08 15.606±4.58 16.813±4.00 12.856±0.00

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