C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription termination factor, RNA polymerase II
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033222 Ttf2 10090 - 3:100938860-100969663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076941 Ttf2-001 100938860-100969663 protein_coding
  ENSMUST00000127357 Ttf2-002 100946350-100969663 retained_intron
  ENSMUST00000145811 Ttf2-004 100941855-100946357 retained_intron
  ENSMUST00000151697 Ttf2-003 100947463-100952606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076941ENSMUST00000127357
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076941 2.762±0.38 2.035±0.60 1.959±0.24 1.736±0.96 1.628±0.27 1.584±0.26 0.715±0.06 1.229±0.19 2.114±1.84 1.297±0.53 1.332±0.13 3.250±1.23 2.636±1.22 1.175±0.47
ENSMUST00000127357 0.480±0.00 0.387±0.04 0.393±0.00 N/A 0.313±0.04 0.338±0.02 0.097±0.00 N/A 0.119±0.00 0.247±0.05 N/A 0.504±0.15 0.689±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005681 IEA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006353 IEA DNA-templated transcription, termination
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086795 TTF2 transcription termination factor, RNA polymerase II protein_coding Danio_rerio
ENSG00000116830 TTF2 transcription termination factor, RNA polymerase II protein_coding Homo_sapiens

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