C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription termination factor, RNA polymerase II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076941 Ttf2-001 ENSMUSG00000033222 10090 - 3:100938860-100969663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076941
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076941 2.762±0.38 2.035±0.60 1.959±0.24 1.736±0.96 1.628±0.27 1.584±0.26 0.715±0.06 1.229±0.19 2.114±1.84 1.297±0.53 1.332±0.13 3.250±1.23 2.636±1.22 1.175±0.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005681 IEA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006353 IEA DNA-templated transcription, termination
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369466 TTF2-001 protein_coding Homo_sapiens 0 2078
ENST00000463696 TTF2-004 processed_transcript Homo_sapiens 0 302
ENST00000470935 TTF2-002 processed_transcript Homo_sapiens 0 363
ENST00000492682 TTF2-003 processed_transcript Homo_sapiens 0 291

Loading