C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036156 Ipo13-001 ENSMUSG00000033365 10090 - 4:117894486-117914999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036156
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036156 24.474±2.51 16.781±3.56 13.672±0.67 21.457±9.90 25.479±8.37 16.294±2.93 26.370±7.62 17.211±2.54 8.017±3.54 28.385±2.98 67.285±3.44 19.435±9.86 5.761±2.27 61.386±27.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 ISO protein import into nucleus
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000085624 ipo13-201 protein_coding Danio_rerio 0 1432
ENST00000372339 IPO13-002 protein_coding Homo_sapiens 0 752
ENST00000372343 IPO13-001 protein_coding Homo_sapiens 0 4723
ENST00000480902 IPO13-006 processed_transcript Homo_sapiens 0 403
ENST00000486876 IPO13-008 processed_transcript Homo_sapiens 0 363
ENST00000489061 IPO13-004 processed_transcript Homo_sapiens 0 211
ENST00000489773 IPO13-003 processed_transcript Homo_sapiens 0 584
ENST00000492152 IPO13-005 processed_transcript Homo_sapiens 0 1098

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