C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amylo-1,6-glucosidase, 4-alpha-glucanotransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033400 Agl 10090 - 3:116739999-116808166 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040603 Agl-201 116739999-116808166 protein_coding
  ENSMUST00000159670 Agl-008 116792128-116807744 protein_coding
  ENSMUST00000159742 Agl-002 116754559-116808129 retained_intron
  ENSMUST00000159995 Agl-005 116780013-116781750 protein_coding
  ENSMUST00000160484 Agl-006 116745178-116781155 protein_coding
  ENSMUST00000161336 Agl-004 116750446-116808042 nonsense_mediated_decay
  ENSMUST00000162040 Agl-003 116790780-116808031 retained_intron
  ENSMUST00000162792 Agl-007 116743051-116807417 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040603ENSMUST00000159742ENSMUST00000160484ENSMUST00000161336ENSMUST00000162792
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040603 1.055±0.03 1.883±0.68 2.002±0.04 0.566±0.06 0.771±0.00 0.605±0.00 N/A 0.692±0.03 1.012±0.49 0.597±0.15 N/A 0.877±0.36 0.969±0.24 0.221±0.02
ENSMUST00000159742 4.671±0.72 4.310±0.00 N/A N/A 8.852±5.23 0.999±0.15 8.477±1.87 2.384±1.12 2.061±0.29 1.310±0.26 N/A 1.612±0.67 2.172±0.00 0.573±0.19
ENSMUST00000160484 N/A N/A N/A 1.586±0.00 N/A N/A N/A N/A N/A N/A N/A 2.362±0.00 1.903±0.50 0.511±0.00
ENSMUST00000161336 N/A 6.567±1.90 N/A 3.738±0.00 2.364±0.98 1.709±0.37 N/A 2.562±0.00 2.392±0.43 1.389±0.00 N/A 3.263±0.98 3.349±0.08 N/A
ENSMUST00000162792 4.843±0.31 2.537±0.64 7.640±1.42 3.019±0.69 8.207±5.54 1.910±0.55 22.431±2.82 5.111±0.91 5.224±3.10 2.609±1.23 116.101±24.09 3.029±1.78 3.591±1.13 1.244±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000109 CIL_000109_0002 CGP 3:116739999-116903750

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004133 IDA glycogen debranching enzyme activity
GO:0004134 IBA 4-alpha-glucanotransferase activity
GO:0004135 IBA amylo-alpha-1,6-glucosidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005977 IDA glycogen metabolic process
GO:0005978 IEA glycogen biosynthetic process
GO:0005980 IBA glycogen catabolic process
GO:0007584 IEA response to nutrient
GO:0009725 IEA response to hormone
GO:0016234 IDA inclusion body
GO:0016529 IEA sarcoplasmic reticulum
GO:0030246 IEA carbohydrate binding
GO:0030247 IDA polysaccharide binding
GO:0031593 IDA polyubiquitin binding
GO:0051384 IEA response to glucocorticoid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012709 agla amylo-1, 6-glucosidase, 4-alpha-glucanotransferase a protein_coding Danio_rerio
ENSDARG00000016491 aglb amylo-1, 6-glucosidase, 4-alpha-glucanotransferase b protein_coding Danio_rerio
ENSDARG00000071488 CABZ01041804.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000162688 AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase protein_coding Homo_sapiens

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