C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylo-1,6-glucosidase, 4-alpha-glucanotransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161336 Agl-004 ENSMUSG00000033400 10090 - 3:116750446-116808042 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000161336
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000161336 6.567±1.90 3.738±0.00 2.364±0.98 1.709±0.37 2.562±0.00 2.392±0.43 1.389±0.00 3.263±0.98 3.349±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000109 CIL_000109_0002 CGP 3:116739999-116903750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004133 IDA glycogen debranching enzyme activity
GO:0004134 IBA 4-alpha-glucanotransferase activity
GO:0004135 IBA amylo-alpha-1,6-glucosidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005977 IDA glycogen metabolic process
GO:0005980 IBA glycogen catabolic process
GO:0016234 IDA inclusion body
GO:0030247 IDA polysaccharide binding
GO:0031593 IDA polyubiquitin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294724 AGL-004 protein_coding Homo_sapiens 0 3022
ENST00000361302 AGL-005 protein_coding Homo_sapiens 0 3022
ENST00000361522 AGL-006 protein_coding Homo_sapiens 0 3022
ENST00000361915 AGL-001 protein_coding Homo_sapiens 0 3022
ENST00000370161 AGL-201 protein_coding Homo_sapiens 0 3022
ENST00000370163 AGL-003 protein_coding Homo_sapiens 0 3022
ENST00000370165 AGL-002 protein_coding Homo_sapiens 0 3022
ENST00000477753 AGL-007 processed_transcript Homo_sapiens 0 388

Loading