C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylo-1,6-glucosidase, 4-alpha-glucanotransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040603 Agl-201 ENSMUSG00000033400 10090 - 3:116739999-116808166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000040603
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000040603 1.055±0.03 1.883±0.68 2.002±0.04 0.566±0.06 0.771±0.00 0.605±0.00 0.692±0.03 1.012±0.49 0.597±0.15 0.877±0.36 0.969±0.24 0.221±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000109 CIL_000109_0002 CGP 3:116739999-116903750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004133 IDA glycogen debranching enzyme activity
GO:0004134 IBA 4-alpha-glucanotransferase activity
GO:0004135 IBA amylo-alpha-1,6-glucosidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005977 IDA glycogen metabolic process
GO:0005978 IEA glycogen biosynthetic process
GO:0005980 IBA glycogen catabolic process
GO:0007584 IEA response to nutrient
GO:0009725 IEA response to hormone
GO:0016234 IDA inclusion body
GO:0016529 IEA sarcoplasmic reticulum
GO:0030246 IEA carbohydrate binding
GO:0030247 IDA polysaccharide binding
GO:0031593 IDA polyubiquitin binding
GO:0051384 IEA response to glucocorticoid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000154380 agla-001 protein_coding Danio_rerio 0 989
ENST00000219478 ZNF500-001 protein_coding Homo_sapiens 0.00001 58
ENST00000294724 AGL-004 protein_coding Homo_sapiens 0 5051
ENST00000361302 AGL-005 protein_coding Homo_sapiens 0 4872
ENST00000361522 AGL-006 protein_coding Homo_sapiens 0 4872
ENST00000361915 AGL-001 protein_coding Homo_sapiens 0 5059
ENST00000370161 AGL-201 protein_coding Homo_sapiens 0 4872
ENST00000370163 AGL-003 protein_coding Homo_sapiens 0 5051
ENST00000370165 AGL-002 protein_coding Homo_sapiens 0 4996
ENST00000477753 AGL-007 processed_transcript Homo_sapiens 0 416

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