C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc and ring finger 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033545 Znrf1 10090 + 8:111536097-111626030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095176 Znrf1-002 111536842-111623778 protein_coding
  ENSMUST00000166859 Znrf1-201 111538343-111626030 protein_coding
  ENSMUST00000168428 Znrf1-202 111536640-111626030 protein_coding
  ENSMUST00000171182 Znrf1-203 111536640-111626030 protein_coding
  ENSMUST00000172856 Znrf1-001 111536097-111625720 protein_coding
  ENSMUST00000173481 Znrf1-009 111538465-111609364 processed_transcript
  ENSMUST00000173506 Znrf1-003 111537120-111622973 protein_coding
  ENSMUST00000173692 Znrf1-006 111561840-111606796 processed_transcript
  ENSMUST00000173726 Znrf1-012 111537463-111621936 protein_coding
  ENSMUST00000173781 Znrf1-010 111541259-111621664 protein_coding
  ENSMUST00000173819 Znrf1-004 111609296-111621775 protein_coding
  ENSMUST00000173922 Znrf1-011 111606748-111622962 nonsense_mediated_decay
  ENSMUST00000174333 Znrf1-008 111538343-111622571 protein_coding
  ENSMUST00000174376 Znrf1-005 111537487-111622501 nonsense_mediated_decay
  ENSMUST00000174454 Znrf1-007 111537578-111622602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000095176ENSMUST00000172856ENSMUST00000173506ENSMUST00000174376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095176 16.380±5.12 15.857±1.83 17.932±6.71 41.341±25.29 15.440±6.57 7.054±1.77 13.126±5.17 7.487±3.79 17.187±8.48 14.355±1.04 29.590±10.71 6.922±3.39 12.793±3.75
ENSMUST00000172856 4.867±0.00 7.082±0.00 N/A 7.871±0.00 N/A N/A N/A N/A N/A N/A 7.588±0.00 N/A 5.135±0.00
ENSMUST00000173506 13.984±0.00 29.419±6.39 22.572±5.28 37.164±16.90 27.648±5.32 14.948±3.21 17.464±0.56 7.225±1.97 17.232±1.23 15.712±1.04 21.350±6.20 10.501±1.23 29.085±13.30
ENSMUST00000174376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.646±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PH CIL_0002PH_0002 CGP 8:111448784-111626030
CIL_0004Y8 CIL_0004Y8_0003 CGP 8:111536097-111630374

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISO:IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0005829 ISO cytosol
GO:0007010 TAS cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016020 ISO membrane
GO:0016567 ISO protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045202 IEA synapse
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020475 znrf1 zinc and ring finger 1 protein_coding Danio_rerio
ENSG00000186187 ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase protein_coding Homo_sapiens

Loading