C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeat LGI family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033595 Lgi3 10090 + 14:70530821-70538323 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047331 Lgi3-201 70530821-70538323 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047331
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047331 0.733±0.24 5.843±0.34 0.908±0.09 6.031±6.45 1.535±0.23 0.383±0.11 0.987±0.42 0.260±0.02 0.069±0.02 116.016±14.69 0.057±0.03 2.408±0.96 0.042±0.01 0.164±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000812 CIL_000812_0002 VISTA 14:70334498-70935318
CIL_0008ZI CIL_0008ZI_0002 VISTA 14:70339990-70941193
CIL_000810 CIL_000810_0002 VISTA 14:70383794-70984839

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0006887 IEA exocytosis
GO:0008021 IDA synaptic vesicle
GO:0008152 IEA metabolic process
GO:0017157 IDA regulation of exocytosis
GO:0030054 IEA cell junction
GO:0043005 IEA neuron projection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041358 lgi3 leucine-rich repeat LGI family, member 3 protein_coding Danio_rerio
ENSG00000168481 LGI3 leucine-rich repeat LGI family, member 3 protein_coding Homo_sapiens

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