C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: suppression of tumorigenicity 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033740 St18 10090 + 1:6487231-6860940 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043578 St18-001 6730051-6860940 protein_coding
  ENSMUST00000124167 St18-010 6730143-6795404 processed_transcript
  ENSMUST00000126379 St18-015 6845568-6858492 processed_transcript
  ENSMUST00000130338 St18-014 6857341-6859604 processed_transcript
  ENSMUST00000131467 St18-007 6730070-6795550 protein_coding
  ENSMUST00000131494 St18-005 6487331-6860940 protein_coding
  ENSMUST00000132207 St18-011 6802791-6809365 processed_transcript
  ENSMUST00000139756 St18-006 6730053-6795425 processed_transcript
  ENSMUST00000139838 St18-008 6734870-6802688 protein_coding
  ENSMUST00000140079 St18-004 6487231-6860934 protein_coding
  ENSMUST00000142304 St18-012 6817600-6833598 processed_transcript
  ENSMUST00000150761 St18-002 6730101-6859470 protein_coding
  ENSMUST00000151015 St18-013 6827897-6848984 processed_transcript
  ENSMUST00000151281 St18-003 6730102-6858813 protein_coding
  ENSMUST00000155921 St18-009 6730176-6802448 protein_coding
  ENSMUST00000163727 St18-201 6737575-6860940 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000043578ENSMUST00000124167ENSMUST00000126379ENSMUST00000130338ENSMUST00000131467ENSMUST00000131494ENSMUST00000132207ENSMUST00000139838ENSMUST00000142304ENSMUST00000150761ENSMUST00000151015ENSMUST00000151281ENSMUST00000155921ENSMUST00000163727
Transcript ID Adipose Adrenal Bladder Brain Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043578 N/A N/A N/A 0.453±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124167 N/A N/A N/A N/A 0.666±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000126379 0.078±0.01 N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A 0.296±0.24
ENSMUST00000130338 N/A 0.419±0.00 N/A N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000131467 N/A 0.392±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131494 N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A 0.008±0.00 N/A N/A
ENSMUST00000132207 N/A 0.269±0.19 N/A N/A N/A 0.024±0.00 N/A N/A 0.057±0.00 N/A N/A
ENSMUST00000139838 N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142304 N/A N/A N/A N/A 0.989±0.00 0.031±0.01 N/A N/A 0.092±0.00 0.018±0.00 N/A
ENSMUST00000150761 N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A
ENSMUST00000151015 N/A 0.116±0.00 N/A 2.761±0.00 0.207±0.00 N/A N/A N/A 0.061±0.02 N/A N/A
ENSMUST00000151281 0.013±0.00 0.035±0.00 0.002±0.00 N/A 0.020±0.00 0.005±0.00 0.033±0.00 N/A N/A 0.001±0.00 0.058±0.03
ENSMUST00000155921 N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00
ENSMUST00000163727 N/A 0.122±0.06 0.005±0.00 1.897±1.18 0.143±0.08 0.004±0.00 N/A 0.007±0.00 0.008±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097E CIL_00097E_0002 VISTA 1:6429232-7030317
CIL_00053O CIL_00053O_0002 CGP 1:6487231-7173628

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091410 st18 suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein) protein_coding Danio_rerio
ENSG00000147488 ST18 suppression of tumorigenicity 18, zinc finger protein_coding Homo_sapiens

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