C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | suppression of tumorigenicity 18 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000140079  |
St18-004 |
ENSMUSG00000033740 |
10090 | + |
1:6487231-6860934  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00097E | CIL_00097E_0002 | VISTA | 1:6429232-7030317 |
| CIL_00053O | CIL_00053O_0002 | CGP | 1:6487231-7173628 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000276480
|
ST18-001 | protein_coding | Homo_sapiens | 0 | 5009 |
|
ENST00000517580
|
ST18-002 | protein_coding | Homo_sapiens | 0 | 1672 |
|
ENST00000518053
|
ST18-019 | retained_intron | Homo_sapiens | 0 | 845 |
|
ENST00000520716
|
ST18-009 | processed_transcript | Homo_sapiens | 0 | 322 |
|
ENST00000521582
|
ST18-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 3068 |
|
ENST00000521824
|
ST18-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 3703 |
|
ENST00000522102
|
ST18-003 | processed_transcript | Homo_sapiens | 0 | 257 |
|
ENST00000522251
|
ST18-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 3637 |
|
ENST00000522861
|
ST18-020 | retained_intron | Homo_sapiens | 0 | 501 |
|
ENST00000524078
|
ST18-004 | retained_intron | Homo_sapiens | 0 | 257 |
