C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: catenin (cadherin associated protein), delta 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034101 Ctnnd1 10090 - 2:84600071-84650765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036811 Ctnnd1-003 84600783-84649480 protein_coding
  ENSMUST00000066177 Ctnnd1-004 84600783-84650510 protein_coding
  ENSMUST00000067232 Ctnnd1-002 84600073-84650676 protein_coding
  ENSMUST00000099941 Ctnnd1-019 84600071-84650745 protein_coding
  ENSMUST00000111670 Ctnnd1-201 84600781-84650740 protein_coding
  ENSMUST00000111675 Ctnnd1-023 84600071-84650745 protein_coding
  ENSMUST00000111676 Ctnnd1-020 84600071-84650745 protein_coding
  ENSMUST00000111677 Ctnnd1-017 84600071-84650745 protein_coding
  ENSMUST00000111678 Ctnnd1-010 84600071-84650745 protein_coding
  ENSMUST00000111684 Ctnnd1-007 84600100-84650745 protein_coding
  ENSMUST00000111685 Ctnnd1-012 84600073-84650745 protein_coding
  ENSMUST00000111686 Ctnnd1-015 84600073-84650745 protein_coding
  ENSMUST00000111687 Ctnnd1-009 84600073-84650745 protein_coding
  ENSMUST00000111688 Ctnnd1-016 84600073-84650745 protein_coding
  ENSMUST00000111689 Ctnnd1-008 84600073-84650745 protein_coding
  ENSMUST00000111690 Ctnnd1-013 84600071-84650745 protein_coding
  ENSMUST00000111691 Ctnnd1-001 84600783-84650765 protein_coding
  ENSMUST00000111692 Ctnnd1-011 84600073-84650745 protein_coding
  ENSMUST00000111693 Ctnnd1-021 84600073-84650745 protein_coding
  ENSMUST00000111694 Ctnnd1-022 84600071-84650745 protein_coding
  ENSMUST00000111695 Ctnnd1-014 84600071-84650745 protein_coding
  ENSMUST00000111696 Ctnnd1-006 84600071-84650745 protein_coding
  ENSMUST00000111697 Ctnnd1-202 84600781-84650740 protein_coding
  ENSMUST00000111698 Ctnnd1-018 84600071-84650745 protein_coding
  ENSMUST00000126092 Ctnnd1-025 84624378-84638105 processed_transcript
  ENSMUST00000131926 Ctnnd1-026 84608987-84612578 processed_transcript
  ENSMUST00000141151 Ctnnd1-027 84602533-84609677 processed_transcript
  ENSMUST00000145312 Ctnnd1-005 84600783-84650540 processed_transcript
  ENSMUST00000149317 Ctnnd1-024 84624417-84648537 processed_transcript
  ENSMUST00000150940 Ctnnd1-028 84602629-84609697 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000036811ENSMUST00000066177ENSMUST00000111670ENSMUST00000111691ENSMUST00000111697
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000036811 N/A N/A N/A 9.389±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000066177 24.802±10.15 17.377±3.73 N/A N/A 18.918±2.19 22.245±6.42 9.250±1.02 21.128±3.19 9.448±0.66 58.390±8.44 5.162±0.05 37.560±7.89 38.994±12.75
ENSMUST00000111670 N/A 18.795±0.00 16.614±1.38 N/A 10.510±0.54 32.279±6.46 N/A 13.235±2.09 11.688±4.76 17.087±0.92 N/A 31.092±10.37 24.843±8.41
ENSMUST00000111691 7.378±0.00 14.576±0.00 15.384±0.00 10.093±0.23 N/A N/A 6.363±0.00 9.066±0.00 8.580±2.50 20.227±1.49 5.327±0.12 15.747±0.00 11.736±1.43
ENSMUST00000111697 N/A 24.437±2.98 15.684±2.14 18.712±7.37 N/A N/A N/A N/A 8.095±2.13 N/A N/A 26.469±4.32 11.608±0.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001738 IMP morphogenesis of a polarized epithelium
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005886 IMP plasma membrane
GO:0005913 IDA cell-cell adherens junction
GO:0005923 IDA tight junction
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007155 IMP cell adhesion
GO:0007435 IMP salivary gland morphogenesis
GO:0016020 IDA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0016337 IMP single organismal cell-cell adhesion
GO:0019903 IPI protein phosphatase binding
GO:0019904 IPI protein domain specific binding
GO:0030027 IDA lamellipodium
GO:0030216 IMP keratinocyte differentiation
GO:0030496 ISS midbody
GO:0045296 IEA cadherin binding
GO:0060690 IMP epithelial cell differentiation involved in salivary gland development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075845 ctnnd1 catenin (cadherin-associated protein), delta 1 protein_coding Danio_rerio
ENSDARG00000078233 ctnnd1 catenin (cadherin-associated protein), delta 1 protein_coding Danio_rerio
ENSG00000198561 CTNND1 catenin (cadherin-associated protein), delta 1 protein_coding Homo_sapiens

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