C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: catenin (cadherin-associated protein), delta 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198561 CTNND1 9606 + 11:57753243-57819546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358694 CTNND1-011 57761797-57819178 protein_coding
  ENST00000361332 CTNND1-008 57761797-57819178 protein_coding
  ENST00000361391 CTNND1-007 57761797-57819178 protein_coding
  ENST00000361796 CTNND1-201 57761762-57819179 protein_coding
  ENST00000399039 CTNND1-202 57753290-57818445 protein_coding
  ENST00000399050 CTNND1-006 57761797-57819178 protein_coding
  ENST00000415361 CTNND1-027 57761797-57819178 protein_coding
  ENST00000426142 CTNND1-005 57761797-57819178 protein_coding
  ENST00000428599 CTNND1-017 57761797-57819178 protein_coding
  ENST00000524579 CTNND1-033 57763853-57791490 protein_coding
  ENST00000524630 CTNND1-002 57753243-57819546 protein_coding
  ENST00000525821 CTNND1-037 57813917-57815481 retained_intron
  ENST00000525902 CTNND1-023 57761797-57819178 protein_coding
  ENST00000526357 CTNND1-025 57761797-57819178 protein_coding
  ENST00000526772 CTNND1-021 57761797-57819178 protein_coding
  ENST00000526938 CTNND1-030 57761818-57816717 protein_coding
  ENST00000527467 CTNND1-018 57761797-57819178 protein_coding
  ENST00000527599 CTNND1-036 57801995-57803990 retained_intron
  ENST00000528232 CTNND1-019 57761797-57819178 protein_coding
  ENST00000528621 CTNND1-015 57761797-57819178 protein_coding
  ENST00000529526 CTNND1-003 57761797-57819178 protein_coding
  ENST00000529873 CTNND1-022 57761797-57819178 protein_coding
  ENST00000529919 CTNND1-001 57753290-57817940 protein_coding
  ENST00000529986 CTNND1-010 57761797-57819178 protein_coding
  ENST00000530068 CTNND1-031 57781603-57796584 protein_coding
  ENST00000530094 CTNND1-026 57761797-57819178 protein_coding
  ENST00000530720 CTNND1-035 57806523-57808535 retained_intron
  ENST00000530748 CTNND1-016 57761797-57819178 protein_coding
  ENST00000531007 CTNND1-038 57810145-57816011 protein_coding
  ENST00000531014 CTNND1-020 57761797-57819178 protein_coding
  ENST00000532245 CTNND1-028 57761797-57819178 protein_coding
  ENST00000532463 CTNND1-009 57761797-57819178 protein_coding
  ENST00000532649 CTNND1-014 57761797-57819178 protein_coding
  ENST00000532787 CTNND1-012 57761797-57819178 protein_coding
  ENST00000532844 CTNND1-024 57761797-57819178 protein_coding
  ENST00000533189 CTNND1-034 57753302-57802124 protein_coding
  ENST00000533667 CTNND1-013 57761797-57819178 protein_coding
  ENST00000534579 CTNND1-029 57761801-57819178 protein_coding
  ENST00000534647 CTNND1-032 57791559-57801794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358694ENST00000361332ENST00000399039ENST00000415361ENST00000426142ENST00000526772ENST00000526938ENST00000529526ENST00000529919ENST00000529986ENST00000530094ENST00000532245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358694 N/A N/A N/A N/A N/A N/A 5.163±0.00 N/A N/A N/A N/A 16.269±0.00 N/A N/A
ENST00000361332 N/A N/A 6.809±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399039 N/A N/A N/A 12.384±0.00 15.912±0.00 N/A N/A N/A N/A 26.070±0.00 3.185±0.00 19.711±0.00 29.160±0.00 33.075±0.00
ENST00000415361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.997±0.00 N/A N/A N/A
ENST00000426142 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.321±0.00 N/A 6.001±0.00 N/A N/A
ENST00000526772 22.433±0.00 10.785±0.00 N/A 10.151±0.00 19.375±0.00 18.414±0.00 N/A 15.185±0.00 N/A N/A N/A N/A N/A 17.745±0.99
ENST00000526938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.025±0.00 N/A N/A N/A
ENST00000529526 N/A N/A N/A N/A N/A N/A N/A N/A 5.862±0.00 N/A N/A N/A N/A N/A
ENST00000529919 N/A N/A N/A 5.971±0.00 N/A N/A N/A 5.825±0.00 11.924±0.00 N/A N/A N/A N/A N/A
ENST00000529986 N/A N/A N/A N/A N/A N/A N/A 11.000±0.00 6.257±0.00 13.706±0.00 N/A 14.542±0.35 23.583±0.00 N/A
ENST00000530094 N/A N/A N/A N/A 8.052±0.00 19.417±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532245 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.133±11.27 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IMP cytosol
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005915 IEA zonula adherens
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007155 NAS cell adhesion
GO:0007420 IEA brain development
GO:0016055 IEA Wnt signaling pathway
GO:0016337 IEA single organismal cell-cell adhesion
GO:0019901 IEA protein kinase binding
GO:0030027 IEA lamellipodium
GO:0030426 IEA growth cone
GO:0030496 IDA midbody
GO:0034329 TAS cell junction assembly
GO:0034332 TAS adherens junction organization
GO:0043197 IEA dendritic spine
GO:0045202 IEA synapse
GO:0045216 TAS cell-cell junction organization
GO:0045296 IEA:IPI cadherin binding
GO:0050839 IEA cell adhesion molecule binding
GO:0070062 IDA extracellular vesicular exosome
GO:0090090 IMP negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075845 ctnnd1 catenin (cadherin-associated protein), delta 1 protein_coding Danio_rerio
ENSDARG00000078233 ctnnd1 catenin (cadherin-associated protein), delta 1 protein_coding Danio_rerio
ENSMUSG00000034101 Ctnnd1 catenin (cadherin associated protein), delta 1 protein_coding Mus_musculus
ENSMUSG00000101645 CTNND1 predicted gene 28635 protein_coding Mus_musculus

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