C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin associated protein), delta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111670 Ctnnd1-201 ENSMUSG00000034101 10090 - 2:84600781-84650740 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000111670
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000111670 18.795±0.00 16.614±1.38 10.510±0.54 32.279±6.46 13.235±2.09 11.688±4.76 17.087±0.92 31.092±10.37 24.843±8.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001738 IMP morphogenesis of a polarized epithelium
GO:0005515 IPI protein binding
GO:0005886 IMP plasma membrane
GO:0005913 IDA cell-cell adherens junction
GO:0005923 IDA tight junction
GO:0007155 IMP cell adhesion
GO:0007435 IMP salivary gland morphogenesis
GO:0016020 IDA membrane
GO:0016337 IMP single organismal cell-cell adhesion
GO:0019904 IPI protein domain specific binding
GO:0030027 IDA lamellipodium
GO:0030216 IMP keratinocyte differentiation
GO:0045296 IEA cadherin binding
GO:0060690 IMP epithelial cell differentiation involved in salivary gland development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358694 CTNND1-011 protein_coding Homo_sapiens 0 4442
ENST00000361332 CTNND1-008 protein_coding Homo_sapiens 0 3397
ENST00000361391 CTNND1-007 protein_coding Homo_sapiens 0 3193
ENST00000361796 CTNND1-201 protein_coding Homo_sapiens 0 4359
ENST00000399039 CTNND1-202 protein_coding Homo_sapiens 0 4047
ENST00000399050 CTNND1-006 protein_coding Homo_sapiens 0 3314
ENST00000415361 CTNND1-027 protein_coding Homo_sapiens 0 3417
ENST00000426142 CTNND1-005 protein_coding Homo_sapiens 0 4440
ENST00000428599 CTNND1-017 protein_coding Homo_sapiens 0 4442
ENST00000524630 CTNND1-002 protein_coding Homo_sapiens 0 4442
ENST00000525902 CTNND1-023 protein_coding Homo_sapiens 0 3363
ENST00000526357 CTNND1-025 protein_coding Homo_sapiens 0 3397
ENST00000526772 CTNND1-021 protein_coding Homo_sapiens 0 3446
ENST00000526938 CTNND1-030 protein_coding Homo_sapiens 0 3110
ENST00000527467 CTNND1-018 protein_coding Homo_sapiens 0 2318
ENST00000527599 CTNND1-036 retained_intron Homo_sapiens 0 540
ENST00000528232 CTNND1-019 protein_coding Homo_sapiens 0 4462
ENST00000528621 CTNND1-015 protein_coding Homo_sapiens 0 4442
ENST00000529526 CTNND1-003 protein_coding Homo_sapiens 0 4442
ENST00000529873 CTNND1-022 protein_coding Homo_sapiens 0 3193
ENST00000529919 CTNND1-001 protein_coding Homo_sapiens 0 4047
ENST00000529986 CTNND1-010 protein_coding Homo_sapiens 0 4545
ENST00000530068 CTNND1-031 protein_coding Homo_sapiens 0 435
ENST00000530094 CTNND1-026 protein_coding Homo_sapiens 0 3500
ENST00000530720 CTNND1-035 retained_intron Homo_sapiens 0 278
ENST00000530748 CTNND1-016 protein_coding Homo_sapiens 0 4359
ENST00000531007 CTNND1-038 protein_coding Homo_sapiens 0 446
ENST00000531014 CTNND1-020 protein_coding Homo_sapiens 0 2401
ENST00000532245 CTNND1-028 protein_coding Homo_sapiens 0 4320
ENST00000532463 CTNND1-009 protein_coding Homo_sapiens 0 4444
ENST00000532649 CTNND1-014 protein_coding Homo_sapiens 0 4442
ENST00000532787 CTNND1-012 protein_coding Homo_sapiens 0 3297
ENST00000532844 CTNND1-024 protein_coding Homo_sapiens 0 3314
ENST00000533189 CTNND1-034 protein_coding Homo_sapiens 0 532
ENST00000533667 CTNND1-013 protein_coding Homo_sapiens 0 2198
ENST00000534579 CTNND1-029 protein_coding Homo_sapiens 0 4442
ENST00000534647 CTNND1-032 protein_coding Homo_sapiens 0 957

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