C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THO complex 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034274 Thoc5 10090 + 11:4895320-4928867 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038237 Thoc5-201 4895343-4928865 protein_coding
  ENSMUST00000101615 Thoc5-001 4895320-4928867 protein_coding
  ENSMUST00000142543 Thoc5-002 4902212-4918225 protein_coding
  ENSMUST00000144371 Thoc5-004 4902212-4914310 processed_transcript
  ENSMUST00000148117 Thoc5-003 4902212-4904465 processed_transcript
  ENSMUST00000155872 Thoc5-005 4915306-4920485 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038237ENSMUST00000101615ENSMUST00000144371
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038237 9.224±1.20 4.879±2.45 11.075±0.89 27.506±11.47 5.657±1.82 6.438±1.88 1.920±0.85 7.766±0.35 9.224±4.93 7.620±0.67 1.382±0.64 8.984±6.02 9.823±4.95 33.758±7.66
ENSMUST00000101615 N/A 1.040±0.00 N/A N/A N/A 2.366±0.12 N/A N/A 1.025±0.00 N/A N/A 7.503±2.93 N/A N/A
ENSMUST00000144371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.207±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000346 IEA transcription export complex
GO:0000347 IEA THO complex
GO:0000445 IEA THO complex part of transcription export complex
GO:0000902 IMP cell morphogenesis
GO:0001824 IMP blastocyst development
GO:0003729 IMP mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0006406 IEA mRNA export from nucleus
GO:0008380 IEA RNA splicing
GO:0010468 IMP regulation of gene expression
GO:0010793 IMP regulation of mRNA export from nucleus
GO:0017145 IMP stem cell division
GO:0030224 ISS monocyte differentiation
GO:0032786 ISS positive regulation of DNA-templated transcription, elongation
GO:0045650 IDA negative regulation of macrophage differentiation
GO:0046784 IEA viral mRNA export from host cell nucleus
GO:0060215 IMP primitive hemopoiesis
GO:2000002 ISS negative regulation of DNA damage checkpoint
GO:2000035 IMP regulation of stem cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038290 thoc5 THO complex 5 protein_coding Danio_rerio
ENSG00000100296 THOC5 THO complex 5 protein_coding Homo_sapiens

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