C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SID1 transmembrane family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034908 Sidt2 10090 - 9:45937857-45955247 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038488 Sidt2-001 45937857-45955247 protein_coding
  ENSMUST00000114573 Sidt2-002 45937875-45954977 protein_coding
  ENSMUST00000159033 Sidt2-005 45939305-45941408 protein_coding
  ENSMUST00000160138 Sidt2-010 45945203-45948255 protein_coding
  ENSMUST00000160598 Sidt2-014 45942346-45944631 retained_intron
  ENSMUST00000160618 Sidt2-012 45943596-45946787 nonsense_mediated_decay
  ENSMUST00000160670 Sidt2-011 45944374-45947791 retained_intron
  ENSMUST00000160911 Sidt2-003 45952441-45955234 retained_intron
  ENSMUST00000160927 Sidt2-013 45942774-45945033 retained_intron
  ENSMUST00000161042 Sidt2-009 45945741-45948307 protein_coding
  ENSMUST00000161606 Sidt2-008 45945669-45951772 protein_coding
  ENSMUST00000162072 Sidt2-004 45945291-45955181 protein_coding
  ENSMUST00000162379 Sidt2-006 45945706-45952004 nonsense_mediated_decay
  ENSMUST00000162529 Sidt2-007 45945353-45951831 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038488ENSMUST00000114573ENSMUST00000160598ENSMUST00000162072
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038488 34.981±4.40 59.455±10.56 29.957±1.08 10.795±4.96 39.277±16.05 18.109±4.75 7.851±3.34 14.412±2.08 11.178±3.63 29.842±4.74 7.626±5.06 44.686±23.03 9.621±3.21 15.383±3.25
ENSMUST00000114573 21.608±7.35 74.457±38.21 N/A 5.187±0.00 38.339±14.77 8.929±1.82 4.849±0.44 13.546±2.48 17.666±15.26 11.563±4.95 3.087±0.00 29.247±11.74 14.148±10.69 9.526±1.08
ENSMUST00000160598 N/A N/A N/A N/A 92.790±6.30 N/A 20.640±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.535±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0003323 IMP type B pancreatic cell development
GO:0003674 ND molecular_function
GO:0005765 IDA lysosomal membrane
GO:0009749 IMP response to glucose
GO:0016021 IEA integral component of membrane
GO:0033227 IEA dsRNA transport
GO:0042593 IMP glucose homeostasis
GO:0044342 IMP type B pancreatic cell proliferation
GO:0051033 IEA RNA transmembrane transporter activity
GO:0061178 IMP regulation of insulin secretion involved in cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045976 sidt2 SID1 transmembrane family, member 2 protein_coding Danio_rerio
ENSG00000149577 SIDT2 SID1 transmembrane family, member 2 protein_coding Homo_sapiens

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