C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SID1 transmembrane family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038488 Sidt2-001 ENSMUSG00000034908 10090 - 9:45937857-45955247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038488
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038488 34.981±4.40 59.455±10.56 29.957±1.08 10.795±4.96 39.277±16.05 18.109±4.75 7.851±3.34 14.412±2.08 11.178±3.63 29.842±4.74 7.626±5.06 44.686±23.03 9.621±3.21 15.383±3.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0003323 IMP type B pancreatic cell development
GO:0003674 ND molecular_function
GO:0005765 IDA lysosomal membrane
GO:0009749 IMP response to glucose
GO:0016021 IEA integral component of membrane
GO:0033227 IEA dsRNA transport
GO:0042593 IMP glucose homeostasis
GO:0044342 IMP type B pancreatic cell proliferation
GO:0051033 IEA RNA transmembrane transporter activity
GO:0061178 IMP regulation of insulin secretion involved in cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000067583 sidt2-201 protein_coding Danio_rerio 0 859
ENST00000278951 SIDT2-005 protein_coding Homo_sapiens 0 1757
ENST00000324225 SIDT2-001 protein_coding Homo_sapiens 0 3493
ENST00000431081 SIDT2-201 protein_coding Homo_sapiens 0 3332
ENST00000524842 SIDT2-010 protein_coding Homo_sapiens 0 946
ENST00000524988 SIDT2-016 retained_intron Homo_sapiens 0 499
ENST00000525065 SIDT2-019 retained_intron Homo_sapiens 0 444
ENST00000525339 SIDT2-009 processed_transcript Homo_sapiens 3e-39 165
ENST00000525478 SIDT2-020 protein_coding Homo_sapiens 0 316
ENST00000526813 SIDT2-013 retained_intron Homo_sapiens 0 499
ENST00000527654 SIDT2-015 retained_intron Homo_sapiens 0 215
ENST00000528397 SIDT2-011 retained_intron Homo_sapiens 0 276
ENST00000529441 SIDT2-002 retained_intron Homo_sapiens 0 712
ENST00000529484 SIDT2-018 retained_intron Homo_sapiens 0 876
ENST00000530948 SIDT2-012 processed_transcript Homo_sapiens 0 436
ENST00000531255 SIDT2-014 retained_intron Homo_sapiens 0 377
ENST00000531353 SIDT2-008 protein_coding Homo_sapiens 0 529
ENST00000532062 SIDT2-004 protein_coding Homo_sapiens 0 804
ENST00000532960 SIDT2-007 protein_coding Homo_sapiens 0 449
ENST00000620360 SIDT2-202 protein_coding Homo_sapiens 0 3480

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