C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SID1 transmembrane family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149577 SIDT2 9606 + 11:117178733-117197445 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278951 SIDT2-005 117179181-117197444 protein_coding
  ENST00000324225 SIDT2-001 117178733-117197442 protein_coding
  ENST00000431081 SIDT2-201 117179223-117197445 protein_coding
  ENST00000524842 SIDT2-010 117179369-117186223 protein_coding
  ENST00000524988 SIDT2-016 117189025-117190282 retained_intron
  ENST00000525065 SIDT2-019 117190728-117193005 retained_intron
  ENST00000525339 SIDT2-009 117179181-117191692 processed_transcript
  ENST00000525478 SIDT2-020 117192579-117196504 protein_coding
  ENST00000526813 SIDT2-013 117187627-117191929 retained_intron
  ENST00000527654 SIDT2-015 117188991-117189439 retained_intron
  ENST00000528397 SIDT2-011 117181444-117182540 retained_intron
  ENST00000529441 SIDT2-002 117185951-117192613 retained_intron
  ENST00000529484 SIDT2-018 117190683-117194151 retained_intron
  ENST00000530948 SIDT2-012 117181464-117184139 processed_transcript
  ENST00000531255 SIDT2-014 117182098-117184090 retained_intron
  ENST00000531353 SIDT2-008 117179688-117182598 protein_coding
  ENST00000532062 SIDT2-004 117192617-117197279 protein_coding
  ENST00000532960 SIDT2-007 117178736-117181831 protein_coding
  ENST00000620360 SIDT2-202 117178932-117197441 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000278951ENST00000324225ENST00000431081ENST00000524842ENST00000529441ENST00000529484ENST00000532062ENST00000532960ENST00000620360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000278951 N/A N/A 0.416±0.00 0.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.870±0.00
ENST00000324225 9.708±0.00 4.164±0.00 0.375±0.00 2.284±0.77 6.449±5.09 4.038±0.00 1.705±0.00 2.627±0.00 2.949±0.00 6.255±0.00 2.207±0.00 10.468±9.22 5.847±0.61 5.619±0.26
ENST00000431081 N/A N/A N/A 3.216±2.64 4.044±2.99 N/A 1.384±0.00 3.209±0.00 0.603±0.00 N/A 1.731±0.62 5.814±4.19 1.865±0.10 N/A
ENST00000524842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.794±0.00 N/A N/A N/A
ENST00000529441 N/A N/A N/A N/A N/A N/A N/A N/A 1.476±0.00 3.050±0.00 N/A N/A N/A N/A
ENST00000529484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.364±0.00 N/A
ENST00000532062 N/A N/A 0.757±0.00 N/A 1.730±0.00 3.815±0.00 0.560±0.00 N/A N/A N/A N/A 6.619±0.00 N/A N/A
ENST00000532960 N/A N/A N/A N/A N/A N/A N/A N/A 3.135±0.00 N/A N/A N/A N/A N/A
ENST00000620360 7.396±0.00 8.193±0.00 N/A 5.527±0.00 15.905±0.00 6.721±0.00 2.638±0.00 4.440±0.00 5.487±0.00 13.691±0.00 2.499±0.00 10.069±0.41 6.745±0.08 7.403±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0003323 IEA type B pancreatic cell development
GO:0005765 IDA lysosomal membrane
GO:0009749 IEA response to glucose
GO:0016021 IEA integral component of membrane
GO:0033227 IEA dsRNA transport
GO:0042593 IEA glucose homeostasis
GO:0044342 IEA type B pancreatic cell proliferation
GO:0051033 IEA RNA transmembrane transporter activity
GO:0061178 IEA regulation of insulin secretion involved in cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045976 sidt2 SID1 transmembrane family, member 2 protein_coding Danio_rerio
ENSMUSG00000034908 Sidt2 SID1 transmembrane family, member 2 protein_coding Mus_musculus

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