C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ataxia, cerebellar, Cayman type homolog (human)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034958 Atcay 10090 - 10:81204508-81230833 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047408 Atcay-001 81204508-81230833 protein_coding
  ENSMUST00000133555 Atcay-003 81209812-81213276 retained_intron
  ENSMUST00000146030 Atcay-002 81204508-81230785 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000047408ENSMUST00000133555ENSMUST00000146030
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000047408 0.048±0.00 0.550±0.29 57.662±1.83 0.653±0.06 0.812±0.16 0.133±0.00 0.006±0.00 N/A N/A 0.019±0.02
ENSMUST00000133555 N/A N/A N/A N/A N/A N/A N/A N/A 0.593±0.30 0.083±0.00
ENSMUST00000146030 0.013±0.00 0.548±0.28 N/A N/A 0.397±0.00 0.086±0.05 0.048±0.06 0.060±0.01 0.117±0.01 0.014±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005739 IEA mitochondrion
GO:0006810 IEA transport
GO:0006915 IBA apoptotic process
GO:0019894 IEA kinesin binding
GO:0030054 IEA cell junction
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0031175 IDA neuron projection development
GO:0031966 IDA mitochondrial membrane
GO:0032880 ISS regulation of protein localization
GO:0043005 IDA neuron projection
GO:0045202 ISS synapse
GO:0048311 ISS mitochondrion distribution
GO:2000212 ISS negative regulation of glutamate metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059781 atcayb ataxia, cerebellar, Cayman type b protein_coding Danio_rerio
ENSDARG00000071678 atcaya ataxia, cerebellar, Cayman type a protein_coding Danio_rerio
ENSDARG00000071682 atcaya ataxia, cerebellar, Cayman type a protein_coding Danio_rerio
ENSG00000167654 ATCAY ataxia, cerebellar, Cayman type protein_coding Homo_sapiens

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