C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxia, cerebellar, Cayman type homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047408 Atcay-001 ENSMUSG00000034958 10090 - 10:81204508-81230833 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverPlacentaENSMUST00000047408
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Placenta
ENSMUST00000047408 0.048±0.00 0.550±0.29 57.662±1.83 0.653±0.06 0.812±0.16 0.133±0.00 0.006±0.00 0.019±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005739 IEA mitochondrion
GO:0006810 IEA transport
GO:0006915 IBA apoptotic process
GO:0019894 IEA kinesin binding
GO:0030054 IEA cell junction
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0031175 IDA neuron projection development
GO:0031966 IDA mitochondrial membrane
GO:0032880 ISS regulation of protein localization
GO:0043005 IDA neuron projection
GO:0045202 ISS synapse
GO:0048311 ISS mitochondrion distribution
GO:2000212 ISS negative regulation of glutamate metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000083470 atcayb-201 protein_coding Danio_rerio 0 274
ENSDART00000136629 atcayb-001 protein_coding Danio_rerio 0 270
ENST00000450849 ATCAY-001 protein_coding Homo_sapiens 0.000007 58
ENST00000595916 ATCAY-006 processed_transcript Homo_sapiens 0.0000007 58
ENST00000597739 ATCAY-002 nonsense_mediated_decay Homo_sapiens 0.000003 58

Loading