C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nei like 2 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035121 Neil2 10090 - 14:63182443-63193541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038229 Neil2-201 63182443-63193541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038229
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038229 0.448±0.11 1.094±0.33 0.250±0.00 0.706±0.19 0.146±0.05 0.084±0.04 0.881±0.24 0.120±0.08 0.229±0.01 0.200±0.13 0.632±0.32 0.723±0.35 0.199±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PQ CIL_0007PQ_0002 VISTA 14:62762164-63363066
CIL_000919 CIL_000919_0002 VISTA 14:62906721-63507169
CIL_0008Y4 CIL_0008Y4_0002 VISTA 14:63067789-63669845

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003684 IEA damaged DNA binding
GO:0003906 IEA DNA-(apurinic or apyrimidinic site) lyase activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005876 IDA spindle microtubule
GO:0006284 IEA base-excision repair
GO:0006289 IEA nucleotide-excision repair
GO:0008017 IDA microtubule binding
GO:0008270 IEA zinc ion binding
GO:0015630 IDA microtubule cytoskeleton
GO:0016799 IEA hydrolase activity, hydrolyzing N-glycosyl compounds

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020079 neil3 nei endonuclease VIII-like 3 (E. coli) protein_coding Danio_rerio
ENSG00000154328 NEIL2 nei endonuclease VIII-like 2 (E. coli) protein_coding Homo_sapiens

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