C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nei endonuclease VIII-like 3 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000020079 neil3 7955 + 14:37635215-37648796 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000015761 neil3-201 37635257-37648786 protein_coding
  ENSDART00000123343 neil3-001 37635215-37648796 protein_coding
  ENSDART00000142930 neil3-002 37635215-37640102 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000015761ENSDART00000123343ENSDART00000142930
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000015761 0.503±0.25 1.159±0.00 11.126±0.00 0.287±0.00 0.967±0.00
ENSDART00000123343 N/A N/A 0.256±0.05 N/A N/A
ENSDART00000142930 0.446±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GU CIL_0000GU_0001 CGP 14:37635215-37657608

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003684 IEA damaged DNA binding
GO:0003906 IEA DNA-(apurinic or apyrimidinic site) lyase activity
GO:0004518 IEA nuclease activity
GO:0004519 IEA endonuclease activity
GO:0006281 IEA DNA repair
GO:0006284 IEA base-excision repair
GO:0006289 IEA nucleotide-excision repair
GO:0008270 IEA zinc ion binding
GO:0016787 IEA hydrolase activity
GO:0016799 IEA hydrolase activity, hydrolyzing N-glycosyl compounds

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000109674 NEIL3 nei endonuclease VIII-like 3 (E. coli) protein_coding Homo_sapiens
ENSG00000154328 NEIL2 nei endonuclease VIII-like 2 (E. coli) protein_coding Homo_sapiens
ENSMUSG00000035121 Neil2 nei like 2 (E. coli) protein_coding Mus_musculus
ENSMUSG00000039396 Neil3 nei like 3 (E. coli) protein_coding Mus_musculus

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