C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleotide binding protein-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035142 Nubpl 10090 + 12:52097737-52312744 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040090 Nubpl-001 52097737-52312744 protein_coding
  ENSMUST00000159485 Nubpl-003 52097761-52101083 retained_intron
  ENSMUST00000159567 Nubpl-004 52132384-52302721 nonsense_mediated_decay
  ENSMUST00000159708 Nubpl-002 52097756-52144780 retained_intron
  ENSMUST00000162111 Nubpl-005 52176087-52271079 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040090ENSMUST00000159485ENSMUST00000159567ENSMUST00000159708ENSMUST00000162111
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040090 2.241±0.28 2.106±1.03 1.030±0.45 0.496±0.32 1.245±0.49 0.869±0.17 1.940±0.40 4.504±0.83 1.924±1.28 1.584±0.15 1.492±0.16 1.924±0.74 0.757±0.54 1.193±0.68
ENSMUST00000159485 N/A 4.773±1.30 N/A N/A N/A N/A N/A N/A 2.115±0.25 N/A N/A N/A 0.493±0.03 N/A
ENSMUST00000159567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.886±0.18 N/A
ENSMUST00000159708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.822±0.83 N/A N/A
ENSMUST00000162111 N/A N/A N/A 3.271±0.00 N/A N/A N/A N/A N/A N/A N/A 11.444±0.00 3.305±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GO CIL_0000GO_0002 CGP 12:52023003-52312744
CIL_0005RC CIL_0005RC_0003 CGP 12:52097737-52567852

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0032981 IEA mitochondrial respiratory chain complex I assembly
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0070584 IEA mitochondrion morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054821 nubpl nucleotide binding protein-like protein_coding Danio_rerio
ENSG00000151413 NUBPL nucleotide binding protein-like protein_coding Homo_sapiens

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