C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleotide binding protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040090 Nubpl-001 ENSMUSG00000035142 10090 + 12:52097737-52312744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040090 2.241±0.28 2.106±1.03 1.030±0.45 0.496±0.32 1.245±0.49 0.869±0.17 1.940±0.40 4.504±0.83 1.924±1.28 1.584±0.15 1.492±0.16 1.924±0.74 0.757±0.54 1.193±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GO CIL_0000GO_0002 CGP 12:52023003-52312744
CIL_0005RC CIL_0005RC_0003 CGP 12:52097737-52567852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0032981 IEA mitochondrial respiratory chain complex I assembly
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0070584 IEA mitochondrion morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281081 NUBPL-001 protein_coding Homo_sapiens 0 1110
ENST00000418681 NUBPL-003 processed_transcript Homo_sapiens 0 551
ENST00000547839 NUBPL-002 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000548937 NUBPL-012 processed_transcript Homo_sapiens 0 558
ENST00000549838 NUBPL-011 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000550005 NUBPL-004 protein_coding Homo_sapiens 4e-34 148
ENST00000550355 NUBPL-010 processed_transcript Homo_sapiens 0 346
ENST00000550649 NUBPL-009 protein_coding Homo_sapiens 0 294
ENST00000551015 NUBPL-013 processed_transcript Homo_sapiens 0 298
ENST00000551314 NUBPL-007 protein_coding Homo_sapiens 0 518
ENST00000552489 NUBPL-006 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000552888 NUBPL-008 retained_intron Homo_sapiens 0 346

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