C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005RC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054821-ENSDARG00000061294 CGP 7955 17:31778138-31855807
GeneTranscriptPositionBiotype
ENSDARG00000036775 (dtd2)
D-tyrosyl-tRNA deacylase 2 		ENSDART00000136199 (dtd2-001) 31776302-31778181 protein_coding
ENSDARG00000054821 (nubpl)
nucleotide binding protein-like 		ENSDART00000077077 (nubpl-001) 31778144-31785978 protein_coding
ENSDART00000129175 (nubpl-201) 31778138-31785981 protein_coding
ENSDARG00000061294 (arhgap5)
Rho GTPase activating protein 5 		ENSDART00000086696 (arhgap5-201) 31802278-31854866 protein_coding
ENSDART00000155073 (arhgap5-002) 31798528-31854833 protein_coding
ENSDART00000156180 (arhgap5-001) 31798539-31855807 protein_coding
CIL_0005RC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151413-ENSG00000100852 CGP 9606 14:31489956-32159728
GeneTranscriptPositionBiotype
ENSG00000100852 (ARHGAP5)
Rho GTPase activating protein 5 		ENST00000216743 (ARHGAP5-005) 32154010-32157216 retained_intron
ENST00000345122 (ARHGAP5-201) 32077289-32159728 protein_coding
ENST00000396582 (ARHGAP5-003) 32077074-32159728 protein_coding
ENST00000432921 (ARHGAP5-202) 32077289-32155138 protein_coding
ENST00000433497 (ARHGAP5-004) 32077309-32157079 protein_coding
ENST00000539826 (ARHGAP5-001) 32076985-32155083 protein_coding
ENST00000554090 (ARHGAP5-008) 32078231-32154633 protein_coding
ENST00000555814 (ARHGAP5-006) 32076114-32090780 protein_coding
ENST00000556191 (ARHGAP5-007) 32078231-32091089 protein_coding
ENST00000556611 (ARHGAP5-002) 32076967-32155011 protein_coding
ENST00000557643 (ARHGAP5-009) 32094038-32154827 nonsense_mediated_decay
ENSG00000151413 (NUBPL)
nucleotide binding protein-like 		ENST00000281081 (NUBPL-001) 31561395-31861224 protein_coding
ENST00000418681 (NUBPL-003) 31714569-31860302 processed_transcript
ENST00000547839 (NUBPL-002) 31561398-31860273 nonsense_mediated_decay
ENST00000548937 (NUBPL-012) 31561436-31703177 processed_transcript
ENST00000549838 (NUBPL-011) 31561476-31787793 nonsense_mediated_decay
ENST00000550005 (NUBPL-004) 31489956-31562197 protein_coding
ENST00000550355 (NUBPL-010) 31561491-31673549 processed_transcript
ENST00000550649 (NUBPL-009) 31561385-31859124 protein_coding
ENST00000551015 (NUBPL-013) 31800857-31850095 processed_transcript
ENST00000551314 (NUBPL-007) 31561624-31787822 protein_coding
ENST00000552489 (NUBPL-006) 31561440-31673508 nonsense_mediated_decay
ENST00000552814 (NUBPL-005) 31526155-31558095 processed_transcript
ENST00000552888 (NUBPL-008) 31843744-31861218 retained_intron
ENSG00000207412 (RNU6-455P)
RNA, U6 small nuclear 455, pseudogene 		ENST00000384681 (RNU6-455P-201) 31686692-31686798 snRNA
ENSG00000257155 (CTD-2213F21.3)
 ENST00000548096 (CTD-2213F21.3-001) 31558507-31561334 antisense
ENSG00000257472 (RP11-159D23.2)
 ENST00000550309 (RP11-159D23.2-001) 31925801-31930146 lincRNA
ENSG00000258196 (CTD-2213F21.4)
 ENST00000547093 (CTD-2213F21.4-001) 31553358-31558498 antisense
ENSG00000258386 (RP11-187E13.2)
 ENST00000556949 (RP11-187E13.2-001) 32006902-32018685 lincRNA
ENSG00000258474 (RP11-187E13.1)
 ENST00000553330 (RP11-187E13.1-001) 31944853-31950382 lincRNA
ENSG00000275002 (RP11-187E13.3)
 ENST00000611153 (RP11-187E13.3-002) 31964550-31965095 processed_transcript
ENST00000613699 (RP11-187E13.3-001) 31964560-31964714 transcribed_unprocessed_pseudogene
CIL_0005RC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035142-ENSMUSG00000035133 CGP 10090 12:52097737-52567852
GeneTranscriptPositionBiotype
ENSMUSG00000035133 (Arhgap5)
Rho GTPase activating protein 5 		ENSMUST00000110725 (Arhgap5-201) 52516077-52567852 protein_coding
ENSMUSG00000035142 (Nubpl)
nucleotide binding protein-like 		ENSMUST00000040090 (Nubpl-001) 52097737-52312744 protein_coding
ENSMUST00000159485 (Nubpl-003) 52097761-52101083 retained_intron
ENSMUST00000159567 (Nubpl-004) 52132384-52302721 nonsense_mediated_decay
ENSMUST00000159708 (Nubpl-002) 52097756-52144780 retained_intron
ENSMUST00000162111 (Nubpl-005) 52176087-52271079 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RC_0001ENSDARG00000036775ENSDART00000136199ENSDARG00000054821ENSDART00000077077ENSDART00000129175ENSDARG00000061294ENSDART00000086696ENSDART00000155073ENSDART00000156180CIL_0005RC_0002ENSG00000100852ENST00000216743ENST00000345122ENST00000396582ENST00000432921ENST00000433497ENST00000539826ENST00000554090ENST00000555814ENST00000556191ENST00000556611ENST00000557643ENSG00000151413ENST00000281081ENST00000418681ENST00000547839ENST00000548937ENST00000549838ENST00000550005ENST00000550355ENST00000550649ENST00000551015ENST00000551314ENST00000552489ENST00000552814ENST00000552888ENSG00000207412ENST00000384681ENSG00000257155ENST00000548096ENSG00000257472ENST00000550309ENSG00000258196ENST00000547093ENSG00000258386ENST00000556949ENSG00000258474ENST00000553330ENSG00000275002ENST00000611153ENST00000613699CIL_0005RC_0003ENSMUSG00000035133ENSMUST00000110725ENSMUSG00000035142ENSMUST00000040090ENSMUST00000159485ENSMUST00000159567ENSMUST00000159708ENSMUST00000162111
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RC_0001ENSDARG00000036775ENSDART00000136199ENSDARG00000054821ENSDART00000077077ENSDART00000129175ENSDARG00000061294ENSDART00000086696ENSDART00000156180CIL_0005RC_0002ENSG00000100852ENST00000216743ENST00000345122ENST00000396582ENST00000433497ENST00000539826ENST00000556191ENST00000556611ENSG00000151413ENST00000281081ENST00000418681ENST00000547839ENST00000548937ENST00000549838ENST00000552489ENST00000552888ENSG00000207412ENST00000384681ENSG00000257155ENST00000548096ENSG00000257472ENST00000550309ENSG00000258196ENST00000547093ENSG00000258386ENST00000556949ENSG00000258474ENST00000553330ENSG00000275002ENST00000611153ENST00000613699CIL_0005RC_0003ENSMUSG00000035133ENSMUST00000110725ENSMUSG00000035142ENSMUST00000040090ENSMUST00000159485ENSMUST00000159567ENSMUST00000159708ENSMUST00000162111
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036775 ENSDART00000136199 N/A N/A N/A 5.106±1.43 N/A N/A 1.707±0.00 5.346±2.32 N/A N/A N/A N/A N/A N/A
ENSDARG00000054821 ENSDART00000077077 N/A N/A N/A 6.246±1.29 N/A N/A 4.364±2.71 4.031±0.00 1.098±0.00 N/A 5.580±0.00 N/A N/A N/A
ENSDART00000129175 N/A N/A N/A N/A N/A N/A 3.098±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061294 ENSDART00000086696 N/A N/A N/A 3.142±0.45 N/A N/A 1.077±0.54 N/A 0.196±0.00 N/A 2.044±0.00 N/A N/A N/A
ENSDART00000155073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156180 N/A N/A N/A 6.275±5.93 N/A N/A 1.387±1.11 0.668±0.00 0.609±0.00 N/A 0.378±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100852 ENST00000216743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.260±0.00 N/A
ENST00000345122 N/A 2.036±0.00 1.804±0.00 8.391±0.90 3.301±0.37 2.457±0.24 2.066±0.23 4.664±0.00 2.097±1.71 4.016±0.73 0.644±0.04 4.274±1.30 1.383±0.78 4.114±2.22
ENST00000396582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.862±0.00 N/A
ENST00000432921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433497 4.611±0.00 3.834±0.00 N/A 9.291±0.00 5.387±0.00 7.936±0.00 5.751±0.00 13.236±0.00 1.542±0.00 4.603±0.00 2.034±0.00 4.450±0.00 2.205±0.00 11.395±0.00
ENST00000539826 N/A N/A 7.618±0.00 6.821±0.00 10.083±0.00 6.806±0.00 6.363±0.00 3.135±0.00 7.785±7.10 10.416±0.00 2.496±0.71 22.515±0.00 1.703±0.58 6.149±0.00
ENST00000554090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.471±0.00
ENST00000556611 3.722±0.00 N/A 3.266±0.00 7.996±0.00 4.623±0.00 3.866±0.00 N/A 4.008±0.00 N/A N/A N/A 3.147±1.17 1.428±0.00 3.641±0.00
ENST00000557643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151413 ENST00000281081 1.489±0.00 1.816±0.00 1.190±0.00 0.639±0.00 2.107±1.64 2.130±0.00 3.025±2.57 2.064±1.17 0.705±0.00 0.402±0.00 0.720±0.00 3.068±1.21 2.402±0.40 2.427±0.19
ENST00000418681 N/A N/A N/A N/A 1.261±0.00 N/A 0.547±0.00 N/A 0.515±0.00 N/A N/A N/A N/A N/A
ENST00000547839 N/A N/A N/A 1.091±0.00 N/A N/A N/A 0.592±0.00 N/A 0.322±0.00 N/A 2.422±0.00 N/A N/A
ENST00000548937 N/A N/A 0.912±0.00 N/A N/A N/A 2.766±0.00 N/A N/A 1.100±0.00 N/A 4.780±0.00 N/A N/A
ENST00000549838 N/A N/A N/A N/A N/A N/A N/A 2.052±0.00 N/A 0.891±0.00 N/A N/A N/A N/A
ENST00000550005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552489 N/A N/A N/A 2.694±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552888 N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 0.131±0.06 0.096±0.00 0.866±0.00 N/A N/A
ENSG00000207412 ENST00000384681 N/A N/A N/A N/A N/A N/A N/A 0.519±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000257155 ENST00000548096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00
ENSG00000257472 ENST00000550309 N/A N/A 0.095±0.00 N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A 0.033±0.00 N/A 0.100±0.00
ENSG00000258196 ENST00000547093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.422±0.08
ENSG00000258386 ENST00000556949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.37 N/A 0.058±0.00
ENSG00000258474 ENST00000553330 0.153±0.00 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A 0.437±0.00 N/A 0.687±0.22 N/A 0.215±0.00
ENSG00000275002 ENST00000611153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A
ENST00000613699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.225±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035133 ENSMUST00000110725 0.925±0.23 1.446±0.34 4.760±0.00 5.764±0.59 1.818±0.85 2.982±0.03 1.535±0.60 1.421±0.00 1.664±1.19 2.139±0.00 1.508±0.80 3.688±2.49 4.881±2.65 3.789±2.86
ENSMUSG00000035142 ENSMUST00000040090 2.241±0.28 2.106±1.03 1.030±0.45 0.496±0.32 1.245±0.49 0.869±0.17 1.940±0.40 4.504±0.83 1.924±1.28 1.584±0.15 1.492±0.16 1.924±0.74 0.757±0.54 1.193±0.68
ENSMUST00000159485 N/A 4.773±1.30 N/A N/A N/A N/A N/A N/A 2.115±0.25 N/A N/A N/A 0.493±0.03 N/A
ENSMUST00000159567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.886±0.18 N/A
ENSMUST00000159708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.822±0.83 N/A N/A
ENSMUST00000162111 N/A N/A N/A 3.271±0.00 N/A N/A N/A N/A N/A N/A N/A 11.444±0.00 3.305±0.00 N/A

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