C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035311 Gnptab 10090 + 10:88379132-88447329 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020251 Gnptab-001 88379226-88447329 protein_coding
  ENSMUST00000127615 Gnptab-005 88379132-88414598 protein_coding
  ENSMUST00000130301 Gnptab-006 88379224-88414555 protein_coding
  ENSMUST00000132738 Gnptab-008 88429566-88433288 processed_transcript
  ENSMUST00000141343 Gnptab-004 88433361-88440862 processed_transcript
  ENSMUST00000151273 Gnptab-002 88379224-88447320 nonsense_mediated_decay
  ENSMUST00000155306 Gnptab-007 88436044-88436729 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020251ENSMUST00000130301ENSMUST00000132738ENSMUST00000141343ENSMUST00000151273
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020251 14.332±1.53 5.172±0.91 7.597±0.07 15.125±1.77 9.616±2.47 5.456±0.74 4.763±0.56 6.384±0.54 2.542±1.22 9.380±0.37 1.950±0.87 5.809±1.73 5.149±2.49 4.287±0.45
ENSMUST00000130301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.737±0.00
ENSMUST00000132738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.729±0.00
ENSMUST00000141343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.206±0.00
ENSMUST00000151273 N/A N/A N/A 3.285±0.00 N/A 0.863±0.00 N/A N/A 0.249±0.03 N/A N/A 2.644±0.00 0.727±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000785 CIL_000785_0002 CGP 10:88322804-88447329
CIL_00078K CIL_00078K_0002 CGP 10:88379132-88504073

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0003976 ISS UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005794 ISS Golgi apparatus
GO:0007040 ISS lysosome organization
GO:0008134 IEA transcription factor binding
GO:0009306 IMP protein secretion
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0046835 IMP carbohydrate phosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030153 gnptab N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein_coding Danio_rerio
ENSG00000111670 GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits protein_coding Homo_sapiens

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