C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151273 Gnptab-002 ENSMUSG00000035311 10090 + 10:88379224-88447320 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryPlacentaENSMUST00000151273
Transcript ID Brain Colon Liver Ovary Placenta
ENSMUST00000151273 3.285±0.00 0.863±0.00 0.249±0.03 2.644±0.00 0.727±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000785 CIL_000785_0002 CGP 10:88322804-88447329
CIL_00078K CIL_00078K_0002 CGP 10:88379132-88504073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009306 IMP protein secretion
GO:0046835 IMP carbohydrate phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299314 GNPTAB-001 protein_coding Homo_sapiens 0 2109
ENST00000392919 GNPTAB-002 protein_coding Homo_sapiens 0 313
ENST00000549165 GNPTAB-009 protein_coding Homo_sapiens 0 187
ENST00000549194 GNPTAB-007 retained_intron Homo_sapiens 0 363
ENST00000549738 GNPTAB-008 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000549940 GNPTAB-003 protein_coding Homo_sapiens 0 1315
ENST00000550718 GNPTAB-011 protein_coding Homo_sapiens 0 289

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