C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020251 Gnptab-001 ENSMUSG00000035311 10090 + 10:88379226-88447329 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020251 14.332±1.53 5.172±0.91 7.597±0.07 15.125±1.77 9.616±2.47 5.456±0.74 4.763±0.56 6.384±0.54 2.542±1.22 9.380±0.37 1.950±0.87 5.809±1.73 5.149±2.49 4.287±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000785 CIL_000785_0002 CGP 10:88322804-88447329
CIL_00078K CIL_00078K_0002 CGP 10:88379132-88504073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0003976 ISS UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005794 ISS Golgi apparatus
GO:0007040 ISS lysosome organization
GO:0008134 IEA transcription factor binding
GO:0009306 IMP protein secretion
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0046835 IMP carbohydrate phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000040445 gnptab-201 protein_coding Danio_rerio 0 200
ENSDART00000101154 gnptab-004 nonsense_mediated_decay Danio_rerio 0 200
ENSDART00000121714 gnptab-001 protein_coding Danio_rerio 0 200
ENST00000299314 GNPTAB-001 protein_coding Homo_sapiens 0 2603
ENST00000392919 GNPTAB-002 protein_coding Homo_sapiens 0 448
ENST00000549165 GNPTAB-009 protein_coding Homo_sapiens 0 318
ENST00000549194 GNPTAB-007 retained_intron Homo_sapiens 0 363
ENST00000549738 GNPTAB-008 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000549940 GNPTAB-003 protein_coding Homo_sapiens 0 1727
ENST00000550718 GNPTAB-011 protein_coding Homo_sapiens 0 289

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