C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sec31 homolog A (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035325 Sec31a 10090 - 5:100361649-100416234 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094578 Sec31a-001 100361649-100416234 protein_coding
  ENSMUST00000182002 Sec31a-007 100365754-100378999 protein_coding
  ENSMUST00000182144 Sec31a-012 100415411-100416166 retained_intron
  ENSMUST00000182171 Sec31a-013 100407682-100409612 retained_intron
  ENSMUST00000182433 Sec31a-011 100361650-100373484 protein_coding
  ENSMUST00000182569 Sec31a-003 100361649-100378913 retained_intron
  ENSMUST00000182664 Sec31a-006 100362146-100364270 retained_intron
  ENSMUST00000182812 Sec31a-005 100362211-100382847 protein_coding
  ENSMUST00000182850 Sec31a-008 100401443-100405571 processed_transcript
  ENSMUST00000182886 Sec31a-002 100361654-100416175 protein_coding
  ENSMUST00000182988 Sec31a-004 100362008-100395901 protein_coding
  ENSMUST00000183247 Sec31a-010 100382879-100392613 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094578ENSMUST00000182002ENSMUST00000182433ENSMUST00000182886ENSMUST00000183247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094578 19.932±5.71 24.230±2.77 7.472±0.12 10.282±0.00 11.231±2.03 24.329±7.83 4.317±0.00 16.231±5.42 13.119±2.34 11.590±2.95 N/A 22.842±7.40 15.292±9.48 13.413±6.34
ENSMUST00000182002 N/A 54.748±3.98 N/A 14.321±0.00 27.528±3.05 55.934±15.04 22.416±1.82 24.835±2.58 28.405±5.97 N/A N/A 46.217±7.64 N/A 25.573±1.55
ENSMUST00000182433 37.109±1.88 N/A 18.820±0.00 19.541±6.09 28.490±4.74 28.249±3.70 20.001±4.83 24.844±2.19 14.544±2.09 23.856±4.13 9.132±1.39 43.939±9.82 39.234±11.94 22.057±1.74
ENSMUST00000182886 9.752±0.63 N/A N/A N/A 6.636±0.31 13.381±0.00 N/A N/A 5.024±0.00 N/A N/A N/A 7.151±0.00 4.664±0.00
ENSMUST00000183247 N/A N/A N/A 47.097±0.00 N/A N/A N/A N/A N/A N/A N/A 105.186±0.00 96.475±23.97 30.388±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030120 ISO vesicle coat
GO:0030134 ISS ER to Golgi transport vesicle
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048306 IEA calcium-dependent protein binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051592 IEA response to calcium ion
GO:0070971 IDA endoplasmic reticulum exit site

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021082 sec31a sec31 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSG00000138674 SEC31A SEC31 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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