C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec31 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094578 Sec31a-001 ENSMUSG00000035325 10090 - 5:100361649-100416234 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000094578
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000094578 19.932±5.71 24.230±2.77 7.472±0.12 10.282±0.00 11.231±2.03 24.329±7.83 4.317±0.00 16.231±5.42 13.119±2.34 11.590±2.95 22.842±7.40 15.292±9.48 13.413±6.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030120 ISO vesicle coat
GO:0030134 ISS ER to Golgi transport vesicle
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048306 IEA calcium-dependent protein binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051592 IEA response to calcium ion
GO:0070971 IDA endoplasmic reticulum exit site

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264405 SEC31A-011 protein_coding Homo_sapiens 0 926
ENST00000311785 SEC31A-201 protein_coding Homo_sapiens 0 3131
ENST00000348405 SEC31A-002 protein_coding Homo_sapiens 0 1832
ENST00000355196 SEC31A-003 protein_coding Homo_sapiens 0 3483
ENST00000395310 SEC31A-001 protein_coding Homo_sapiens 0 3579
ENST00000436790 SEC31A-006 processed_transcript Homo_sapiens 0 1869
ENST00000443462 SEC31A-007 protein_coding Homo_sapiens 0 3297
ENST00000448323 SEC31A-202 protein_coding Homo_sapiens 0 3589
ENST00000500777 SEC31A-013 protein_coding Homo_sapiens 0 1827
ENST00000503058 SEC31A-023 protein_coding Homo_sapiens 0 808
ENST00000503210 SEC31A-039 protein_coding Homo_sapiens 0 315
ENST00000503226 SEC31A-032 retained_intron Homo_sapiens 0 446
ENST00000503937 SEC31A-014 protein_coding Homo_sapiens 0 1424
ENST00000505472 SEC31A-012 protein_coding Homo_sapiens 0 2929
ENST00000505984 SEC31A-010 protein_coding Homo_sapiens 0 1840
ENST00000506497 SEC31A-022 processed_transcript Homo_sapiens 0 568
ENST00000507340 SEC31A-016 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000507816 SEC31A-017 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000507828 SEC31A-028 protein_coding Homo_sapiens 0 887
ENST00000507867 SEC31A-019 processed_transcript Homo_sapiens 0 398
ENST00000508479 SEC31A-008 protein_coding Homo_sapiens 0 3049
ENST00000508502 SEC31A-005 protein_coding Homo_sapiens 0 3478
ENST00000509142 SEC31A-004 protein_coding Homo_sapiens 0 3133
ENST00000509691 SEC31A-036 retained_intron Homo_sapiens 0 195
ENST00000510167 SEC31A-029 protein_coding Homo_sapiens 0 649
ENST00000510310 SEC31A-015 processed_transcript Homo_sapiens 0 228
ENST00000511338 SEC31A-033 protein_coding Homo_sapiens 0 435
ENST00000511975 SEC31A-020 processed_transcript Homo_sapiens 0 603
ENST00000512664 SEC31A-030 protein_coding Homo_sapiens 0 446
ENST00000512732 SEC31A-031 retained_intron Homo_sapiens 0 555
ENST00000513323 SEC31A-026 protein_coding Homo_sapiens 0 676
ENST00000513858 SEC31A-009 protein_coding Homo_sapiens 0 1840
ENST00000514326 SEC31A-025 protein_coding Homo_sapiens 0 684
ENST00000514362 SEC31A-035 retained_intron Homo_sapiens 0 285
ENST00000515749 SEC31A-034 retained_intron Homo_sapiens 0 449

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