C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium voltage-gated channel, subfamily H (eag-related), member 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035580 Kcnh8 10090 + 17:52602709-52979194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039366 Kcnh8-001 52602709-52979194 protein_coding
  ENSMUST00000184279 Kcnh8-002 52950060-52978379 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039366ENSMUST00000184279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039366 0.039±0.00 0.071±0.01 0.045±0.01 1.335±0.85 0.047±0.05 0.217±0.12 0.025±0.02 0.017±0.00 0.005±0.00 0.030±0.01 0.017±0.00 0.084±0.03 0.001±0.00 0.455±0.27
ENSMUST00000184279 0.016±0.00 0.062±0.01 0.046±0.00 0.613±0.43 0.179±0.09 0.117±0.05 0.042±0.01 0.035±0.01 0.013±0.01 0.032±0.00 0.012±0.00 0.085±0.05 0.015±0.00 1.447±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HR CIL_0004HR_0002 CGP 17:51736187-52979194
CIL_0008WQ CIL_0008WQ_0002 VISTA 17:52007830-52609076
CIL_00088Q CIL_00088Q_0002 VISTA 17:52029852-52630752
CIL_0007ZH CIL_0007ZH_0002 VISTA 17:52159484-52761092
CIL_0008BJ CIL_0008BJ_0002 VISTA 17:52165120-52765827
CIL_0004HS CIL_0004HS_0002 CGP 17:52602709-53463321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005887 IBA integral component of plasma membrane
GO:0023014 IEA signal transduction by phosphorylation
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062640 kcnh8 potassium voltage-gated channel, subfamily H (eag-related), member 8 protein_coding Danio_rerio
ENSG00000183960 KCNH8 potassium voltage-gated channel, subfamily H (eag-related), member 8 protein_coding Homo_sapiens

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