C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182568-ENSG00000183960 CGP 9606 3:18345387-19535646
GeneTranscriptPositionBiotype
ENSG00000131374 (TBC1D5)
TBC1 domain family, member 5 		ENST00000253692 (TBC1D5-001) 17157162-17740907 protein_coding
ENST00000412981 (TBC1D5-009) 17404694-17742601 nonsense_mediated_decay
ENST00000414318 (TBC1D5-003) 17160372-18444817 processed_transcript
ENST00000414349 (TBC1D5-029) 17404906-17742594 protein_coding
ENST00000415814 (TBC1D5-020) 17383974-17742652 protein_coding
ENST00000423331 (TBC1D5-021) 17576482-17742612 processed_transcript
ENST00000425944 (TBC1D5-016) 17404714-17742615 protein_coding
ENST00000428355 (TBC1D5-019) 17404707-17742615 protein_coding
ENST00000429383 (TBC1D5-002) 17160372-17742498 protein_coding
ENST00000429924 (TBC1D5-005) 17184577-17406720 protein_coding
ENST00000430169 (TBC1D5-010) 17404732-17742604 nonsense_mediated_decay
ENST00000433533 (TBC1D5-024) 17508481-17702354 protein_coding
ENST00000434420 (TBC1D5-022) 17406472-17623916 protein_coding
ENST00000443386 (TBC1D5-014) 17406418-17739479 processed_transcript
ENST00000443499 (TBC1D5-012) 17404910-17742615 processed_transcript
ENST00000444471 (TBC1D5-023) 17508474-17742615 protein_coding
ENST00000444756 (TBC1D5-013) 17406418-17742601 processed_transcript
ENST00000445294 (TBC1D5-011) 17404747-17742615 protein_coding
ENST00000446818 (TBC1D5-004) 17160557-17700020 protein_coding
ENST00000446863 (TBC1D5-018) 17406456-17742575 protein_coding
ENST00000452492 (TBC1D5-008) 17403201-17742607 nonsense_mediated_decay
ENST00000465884 (TBC1D5-006) 17337389-17372134 processed_transcript
ENST00000471679 (TBC1D5-028) 17644041-17742739 processed_transcript
ENST00000473612 (TBC1D5-007) 17623715-17672675 processed_transcript
ENST00000480435 (TBC1D5-026) 17575203-17700014 processed_transcript
ENST00000481396 (TBC1D5-025) 17508549-17742644 processed_transcript
ENST00000485432 (TBC1D5-027) 17586352-17742748 processed_transcript
ENST00000486224 (TBC1D5-015) 17508474-17623913 processed_transcript
ENST00000497531 (TBC1D5-017) 17406418-17742564 processed_transcript
ENST00000507877 (TBC1D5-030) 17406430-17700006 protein_coding
ENSG00000182568 (SATB1)
SATB homeobox 1 		ENST00000338745 (SATB1-001) 18345387-18425337 protein_coding
ENST00000414509 (SATB1-011) 18416942-18438692 protein_coding
ENST00000415069 (SATB1-006) 18416023-18445588 protein_coding
ENST00000417717 (SATB1-004) 18347940-18424573 protein_coding
ENST00000440737 (SATB1-008) 18397256-18444883 protein_coding
ENST00000444341 (SATB1-012) 18420756-18435253 protein_coding
ENST00000450898 (SATB1-013) 18420944-18425369 protein_coding
ENST00000452260 (SATB1-015) 18416004-18421388 protein_coding
ENST00000454909 (SATB1-002) 18347940-18438773 protein_coding
ENST00000457005 (SATB1-014) 18416901-18424740 protein_coding
ENST00000467628 (SATB1-019) 18351803-18378327 retained_intron
ENST00000475083 (SATB1-016) 18397214-18417510 protein_coding
ENST00000476178 (SATB1-007) 18349541-18351531 retained_intron
ENST00000482788 (SATB1-018) 18414949-18416126 retained_intron
ENST00000487699 (SATB1-010) 18420685-18438734 retained_intron
ENST00000491519 (SATB1-017) 18410798-18417393 protein_coding
ENST00000493952 (SATB1-009) 18417576-18444873 protein_coding
ENST00000606296 (SATB1-003) 18348885-18353084 retained_intron
ENSG00000183960 (KCNH8)
potassium voltage-gated channel, subfamily H (eag-related), member 8 		ENST00000328405 (KCNH8-001) 19148454-19535646 protein_coding
ENST00000452398 (KCNH8-002) 19148534-19534739 nonsense_mediated_decay
ENST00000475063 (KCNH8-003) 19347721-19395277 processed_transcript
ENSG00000228956 (SATB1-AS1)
SATB1 antisense RNA 1 		ENST00000414198 (SATB1-AS1-001) 18445024-18526508 antisense
ENST00000425799 (SATB1-AS1-022) 18693887-18917692 antisense
ENST00000438418 (SATB1-AS1-002) 18462811-18466009 retained_intron
ENST00000453361 (SATB1-AS1-021) 18745744-18747491 antisense
ENST00000456253 (SATB1-AS1-005) 18465983-18585762 antisense
ENST00000593444 (SATB1-AS1-008) 18465992-18530154 antisense
ENST00000593741 (SATB1-AS1-003) 18464330-18530394 antisense
ENST00000595250 (SATB1-AS1-010) 18465983-18585762 antisense
ENST00000595388 (SATB1-AS1-020) 18465983-18764059 antisense
ENST00000595865 (SATB1-AS1-009) 18465983-18591770 antisense
ENST00000596139 (SATB1-AS1-016) 18527172-18607187 antisense
ENST00000596152 (SATB1-AS1-019) 18526396-18625427 antisense
ENST00000596277 (SATB1-AS1-012) 18465983-18534762 antisense
ENST00000596307 (SATB1-AS1-013) 18465983-18591737 antisense
ENST00000596850 (SATB1-AS1-018) 18465983-18530049 antisense
ENST00000598149 (SATB1-AS1-004) 18445237-18469702 antisense
ENST00000598390 (SATB1-AS1-014) 18465983-18591984 antisense
ENST00000598498 (SATB1-AS1-007) 18465983-18534897 antisense
ENST00000598688 (SATB1-AS1-006) 18465983-18535024 antisense
ENST00000598740 (SATB1-AS1-011) 18465983-18527638 antisense
ENST00000599762 (SATB1-AS1-015) 18465983-18604241 antisense
ENST00000600177 (SATB1-AS1-017) 18527172-18607184 antisense
ENST00000609327 (SATB1-AS1-024) 18463662-18466009 retained_intron
ENST00000610002 (SATB1-AS1-023) 18462811-18466004 retained_intron
ENST00000616514 (SATB1-AS1-025) 18525791-18527231 retained_intron
ENSG00000236570 (RAD23BP1)
RAD23 homolog B (S. cerevisiae) pseudogene 1 		ENST00000421404 (RAD23BP1-001) 18538673-18539899 processed_pseudogene
ENSG00000272477 (RP11-158G18.1)
 ENST00000607148 (RP11-158G18.1-001) 18408680-18409635 sense_intronic
CIL_0004HR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023927-ENSMUSG00000035580 CGP 10090 17:51736187-52979194
GeneTranscriptPositionBiotype
ENSMUSG00000035580 (Kcnh8)
potassium voltage-gated channel, subfamily H (eag-related), member 8 		ENSMUST00000039366 (Kcnh8-001) 52602709-52979194 protein_coding
ENSMUST00000184279 (Kcnh8-002) 52950060-52978379 retained_intron
ENSMUSG00000098552 (Gm27217)
predicted gene 27217 		ENSMUST00000183438 (Gm27217-001) 52592981-52602660 antisense
ENSMUSG00000100150 (RP23-307A6.1)
predicted gene, 19585 		ENSMUST00000186007 (RP23-307A6.1-001) 52149289-52163048 lincRNA
ENSMUST00000191539 (RP23-307A6.1-002) 52160143-52162844 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HR_0001ENSG00000131374ENST00000253692ENST00000412981ENST00000414318ENST00000414349ENST00000415814ENST00000423331ENST00000425944ENST00000428355ENST00000429383ENST00000429924ENST00000430169ENST00000433533ENST00000434420ENST00000443386ENST00000443499ENST00000444471ENST00000444756ENST00000445294ENST00000446818ENST00000446863ENST00000452492ENST00000465884ENST00000471679ENST00000473612ENST00000480435ENST00000481396ENST00000485432ENST00000486224ENST00000497531ENST00000507877ENSG00000182568ENST00000338745ENST00000414509ENST00000415069ENST00000417717ENST00000440737ENST00000444341ENST00000450898ENST00000452260ENST00000454909ENST00000457005ENST00000467628ENST00000475083ENST00000476178ENST00000482788ENST00000487699ENST00000491519ENST00000493952ENST00000606296ENSG00000183960ENST00000328405ENST00000452398ENST00000475063ENSG00000228956ENST00000414198ENST00000425799ENST00000438418ENST00000453361ENST00000456253ENST00000593444ENST00000593741ENST00000595250ENST00000595388ENST00000595865ENST00000596139ENST00000596152ENST00000596277ENST00000596307ENST00000596850ENST00000598149ENST00000598390ENST00000598498ENST00000598688ENST00000598740ENST00000599762ENST00000600177ENST00000609327ENST00000610002ENST00000616514ENSG00000236570ENST00000421404ENSG00000272477ENST00000607148CIL_0004HR_0002ENSMUSG00000035580ENSMUST00000039366ENSMUST00000184279ENSMUSG00000098552ENSMUST00000183438ENSMUSG00000100150ENSMUST00000186007ENSMUST00000191539
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HR_0001ENSG00000131374ENST00000253692ENST00000429383ENSG00000182568ENST00000338745ENST00000417717ENST00000454909ENSG00000183960ENST00000328405ENST00000452398ENST00000475063ENSG00000228956ENST00000414198ENST00000425799ENST00000438418ENST00000593444ENST00000593741ENST00000595250ENST00000596277ENST00000596307ENST00000596850ENST00000598149ENST00000598390ENST00000598498ENST00000599762ENST00000609327ENST00000616514ENSG00000236570ENST00000421404ENSG00000272477ENST00000607148CIL_0004HR_0002ENSMUSG00000035580ENSMUST00000039366ENSMUST00000184279ENSMUSG00000098552ENSMUST00000183438ENSMUSG00000100150ENSMUST00000186007ENSMUST00000191539
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131374 ENST00000253692 N/A N/A 2.757±0.00 N/A N/A N/A 4.863±0.00 N/A 3.569±0.00 3.131±0.00 1.420±0.00 4.419±0.00 N/A N/A
ENST00000412981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429383 N/A N/A 3.603±0.00 N/A N/A N/A N/A 5.257±0.00 N/A 4.678±0.00 N/A 7.644±0.00 N/A N/A
ENST00000429924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182568 ENST00000338745 N/A 1.723±0.00 N/A 3.738±0.50 N/A 2.726±0.00 1.485±0.30 1.590±0.00 2.032±1.58 0.997±0.00 1.275±0.20 N/A N/A N/A
ENST00000414509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417717 4.003±0.00 N/A 3.649±0.00 5.418±0.26 5.889±1.16 4.574±0.60 5.994±3.21 N/A 3.975±3.12 3.997±1.74 9.612±3.39 N/A N/A 2.561±0.00
ENST00000440737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454909 N/A 3.768±0.00 N/A 9.568±0.00 N/A 5.714±0.00 N/A 3.222±0.00 0.930±0.00 2.755±0.00 3.353±0.00 0.952±0.00 N/A 4.089±0.98
ENST00000457005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183960 ENST00000328405 0.001±0.00 0.524±0.00 0.018±0.00 0.750±0.18 N/A N/A 0.035±0.00 0.031±0.00 0.001±0.00 0.062±0.00 N/A 0.038±0.01 0.014±0.01 0.462±0.17
ENST00000452398 0.001±0.00 N/A 0.019±0.00 1.262±0.25 0.278±0.00 N/A 0.021±0.00 N/A 0.001±0.00 N/A N/A 0.048±0.03 N/A N/A
ENST00000475063 0.017±0.00 N/A N/A N/A N/A N/A 0.361±0.00 N/A N/A N/A N/A N/A 0.147±0.12 N/A
ENSG00000228956 ENST00000414198 N/A N/A N/A N/A N/A 1.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.121±0.00
ENST00000425799 N/A N/A N/A N/A N/A N/A N/A 1.204±0.00 N/A N/A N/A 0.107±0.02 N/A 0.099±0.03
ENST00000438418 N/A N/A N/A 0.157±0.00 0.096±0.07 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.032±0.00
ENST00000453361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593444 N/A N/A N/A N/A N/A 1.006±0.00 N/A N/A 0.029±0.00 N/A N/A N/A 0.159±0.00 N/A
ENST00000593741 N/A 0.454±0.00 0.155±0.00 N/A 0.213±0.17 N/A N/A N/A 0.619±0.00 0.585±0.06 N/A 0.036±0.00 0.051±0.00 0.038±0.00
ENST00000595250 N/A N/A N/A N/A N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A
ENST00000596307 N/A 0.587±0.00 N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00
ENST00000598149 N/A N/A N/A 0.250±0.00 0.155±0.09 1.304±0.00 0.012±0.00 0.435±0.00 N/A 0.917±0.00 N/A N/A N/A 0.103±0.00
ENST00000598390 N/A N/A N/A 1.412±1.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598498 N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.024±0.00 0.089±0.00 0.099±0.00
ENST00000598688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599762 N/A N/A N/A 1.347±1.05 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A
ENST00000600177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609327 N/A N/A N/A N/A N/A 0.388±0.00 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000610002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616514 N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.113±0.00 N/A N/A N/A
ENSG00000236570 ENST00000421404 N/A 0.011±0.00 N/A 0.147±0.09 0.026±0.01 0.010±0.00 0.019±0.00 N/A 0.107±0.00 0.038±0.03 0.055±0.00 N/A N/A 0.019±0.00
ENSG00000272477 ENST00000607148 N/A 0.033±0.00 N/A 0.274±0.27 N/A 0.114±0.00 0.008±0.00 0.072±0.00 0.648±0.00 0.941±0.00 N/A N/A N/A 0.031±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035580 ENSMUST00000039366 0.039±0.00 0.071±0.01 0.045±0.01 1.335±0.85 0.047±0.05 0.217±0.12 0.025±0.02 0.017±0.00 0.005±0.00 0.030±0.01 0.017±0.00 0.084±0.03 0.001±0.00 0.455±0.27
ENSMUST00000184279 0.016±0.00 0.062±0.01 0.046±0.00 0.613±0.43 0.179±0.09 0.117±0.05 0.042±0.01 0.035±0.01 0.013±0.01 0.032±0.00 0.012±0.00 0.085±0.05 0.015±0.00 1.447±0.73
ENSMUSG00000098552 ENSMUST00000183438 N/A 0.283±0.06 0.027±0.00 1.392±0.87 0.050±0.01 0.309±0.08 N/A N/A N/A N/A N/A 0.256±0.06 N/A 0.088±0.03
ENSMUSG00000100150 ENSMUST00000186007 N/A N/A 0.216±0.04 0.052±0.00 0.301±0.12 N/A N/A 0.099±0.01 0.062±0.06 0.193±0.09 0.065±0.00 0.174±0.12 0.079±0.00 N/A
ENSMUST00000191539 N/A N/A N/A N/A 0.832±0.35 N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A

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