C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FERM and PDZ domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035615 Frmpd1 10090 + 4:45184875-45285936 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044773 Frmpd1-201 45184906-45285936 protein_coding
  ENSMUST00000107804 Frmpd1-001 45203925-45285936 protein_coding
  ENSMUST00000134280 Frmpd1-002 45184875-45261900 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044773ENSMUST00000107804ENSMUST00000134280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044773 0.071±0.06 1.237±0.58 0.091±0.01 1.292±1.29 0.289±0.07 0.179±0.06 0.121±0.03 0.359±0.11 0.036±0.02 1.434±0.20 0.360±0.14 0.718±0.25 10.249±13.15 0.894±0.15
ENSMUST00000107804 0.108±0.06 0.780±0.65 N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A 0.282±0.10 N/A N/A
ENSMUST00000134280 N/A N/A N/A 6.359±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 45.661±27.20 3.558±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080S CIL_00080S_0002 VISTA 4:44617363-45218981
CIL_0006TI CIL_0006TI_0002 CGP 4:45184875-45316131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079074 FRMPD1 FERM and PDZ domain containing 1 protein_coding Danio_rerio
ENSDARG00000087008 CU638740.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090827 BX088718.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091264 FERM and PDZ domain containing 1 protein_coding Danio_rerio
ENSDARG00000091472 FERM and PDZ domain containing 1 protein_coding Danio_rerio
ENSG00000070601 FRMPD1 FERM and PDZ domain containing 1 protein_coding Homo_sapiens

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