C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD99 antigen-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035776 Cd99l2 10090 - X:71420060-71492849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037391 Cd99l2-001 71420060-71492849 protein_coding
  ENSMUST00000080035 Cd99l2-006 71420060-71492645 protein_coding
  ENSMUST00000114586 Cd99l2-002 71420060-71492849 protein_coding
  ENSMUST00000114587 Cd99l2-004 71422624-71492849 protein_coding
  ENSMUST00000128515 Cd99l2-005 71439335-71492649 retained_intron
  ENSMUST00000148177 Cd99l2-003 71491899-71492605 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037391ENSMUST00000080035ENSMUST00000114587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037391 13.104±2.05 12.149±2.35 10.711±0.24 12.019±6.31 7.362±0.42 4.065±0.74 5.301±0.42 8.248±1.29 3.700±0.98 6.048±0.43 5.391±0.99 9.216±1.79 3.093±1.51 1.205±0.14
ENSMUST00000080035 7.980±1.13 6.958±2.38 9.186±0.70 8.365±2.75 11.177±6.33 2.665±0.93 15.610±2.10 4.517±0.88 3.072±1.07 6.580±0.87 14.811±0.74 5.290±2.97 2.476±0.98 1.085±0.32
ENSMUST00000114587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.263±0.00 3.706±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GF CIL_0007GF_0003 CGP X:71364760-71492849
CIL_0009DG CIL_0009DG_0002 VISTA X:71400355-72001555
CIL_0000UN CIL_0000UN_0003 CGP X:71420060-71560676

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051975 cd99 CD99 molecule protein_coding Danio_rerio
ENSDARG00000056722 cd99l2 CD99 antigen-like 2 protein_coding Danio_rerio
ENSDARG00000087508 CD99L2 (3 of 3) CD99 molecule-like 2 protein_coding Danio_rerio
ENSG00000102181 CD99L2 CD99 molecule-like 2 protein_coding Homo_sapiens

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