C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GRAM domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035900 Gramd4 10090 + 15:86057695-86137634 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088931 Gramd4-001 86057695-86137634 protein_coding
  ENSMUST00000123349 Gramd4-003 86058872-86137631 nonsense_mediated_decay
  ENSMUST00000123474 Gramd4-005 86067813-86122261 processed_transcript
  ENSMUST00000138134 Gramd4-002 86058727-86137618 protein_coding
  ENSMUST00000147286 Gramd4-004 86074733-86091434 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088931ENSMUST00000123349ENSMUST00000123474ENSMUST00000138134
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088931 10.360±2.83 2.869±0.90 4.066±0.22 9.190±7.57 7.614±2.64 4.971±1.75 11.000±1.20 6.337±0.66 3.131±1.89 7.538±0.73 3.595±0.71 5.490±2.61 4.014±2.25 0.258±0.21
ENSMUST00000123349 2.215±0.72 N/A 0.933±0.28 2.932±0.15 2.557±0.65 2.077±0.05 N/A N/A 0.659±0.21 1.362±0.12 N/A 1.589±0.40 0.474±0.00 0.032±0.00
ENSMUST00000123474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.284±0.00 22.317±8.59 1.312±0.00
ENSMUST00000138134 2.494±0.30 4.304±0.00 N/A 4.021±1.91 5.173±2.57 6.565±2.65 3.071±0.70 3.284±0.60 1.152±0.44 4.499±1.05 0.770±0.00 4.830±1.75 1.161±0.55 0.209±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BF CIL_0008BF_0002 VISTA 15:85812646-86415385
CIL_0000V3 CIL_0000V3_0003 CGP 15:85898758-86137634
CIL_00024X CIL_00024X_0002 CGP 15:86057695-86186141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0006915 IEA apoptotic process
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045506 GRAMD4 (1 of 2) GRAM domain containing 4 protein_coding Danio_rerio
ENSDARG00000069171 gramd4 GRAM domain containing 4 protein_coding Danio_rerio
ENSG00000075240 GRAMD4 GRAM domain containing 4 protein_coding Homo_sapiens

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