C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: muscleblind-like 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036109 Mbnl3 10090 - X:51117269-51206532 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041495 Mbnl3-003 51120080-51146415 protein_coding
  ENSMUST00000114875 Mbnl3-002 51117269-51205832 protein_coding
  ENSMUST00000114876 Mbnl3-001 51120080-51205990 protein_coding
  ENSMUST00000136404 Mbnl3-006 51120489-51164674 protein_coding
  ENSMUST00000148116 Mbnl3-005 51120885-51139366 processed_transcript
  ENSMUST00000150014 Mbnl3-004 51120452-51127370 retained_intron
  ENSMUST00000156028 Mbnl3-007 51164417-51206532 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041495ENSMUST00000114875ENSMUST00000114876ENSMUST00000136404ENSMUST00000148116ENSMUST00000150014ENSMUST00000156028
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041495 0.936±0.33 0.237±0.13 N/A 1.940±0.25 1.519±0.84 0.187±0.05 0.220±0.08 0.117±0.06 1.300±0.93 N/A 0.935±0.41 32.216±6.23 0.537±0.09
ENSMUST00000114875 0.529±0.08 0.190±0.12 N/A 0.620±0.21 0.885±0.28 0.033±0.01 0.133±0.02 0.053±0.03 0.772±0.19 0.015±0.01 0.795±0.35 N/A 0.169±0.00
ENSMUST00000114876 0.496±0.23 0.242±0.00 0.263±0.00 0.921±0.89 1.520±0.59 N/A 0.128±0.07 0.088±0.00 1.115±0.36 N/A 0.916±0.45 8.033±0.00 1.360±0.29
ENSMUST00000136404 N/A 0.115±0.02 N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A
ENSMUST00000148116 N/A N/A N/A 1.752±0.00 N/A 0.120±0.00 0.174±0.00 0.103±0.02 N/A 0.072±0.03 0.837±0.34 N/A 0.601±0.00
ENSMUST00000150014 N/A 0.060±0.00 N/A 0.236±0.05 0.382±0.00 0.015±0.00 0.070±0.02 0.043±0.02 0.275±0.00 0.009±0.00 0.304±0.10 N/A N/A
ENSMUST00000156028 N/A N/A N/A N/A N/A N/A N/A 0.504±0.00 N/A 0.181±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GI CIL_0000GI_0003 CGP X:51003912-51206532
CIL_0000T0 CIL_0000T0_0002 CGP X:51117269-51681856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0007275 IEA multicellular organismal development
GO:0008380 IEA RNA splicing
GO:0043484 ISS regulation of RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:0045662 IDA negative regulation of myoblast differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016085 mbnl3 muscleblind-like 3 (Drosophila) protein_coding Danio_rerio
ENSG00000076770 MBNL3 muscleblind-like splicing regulator 3 protein_coding Homo_sapiens

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