C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000T0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000076770-ENSG00000171004 CGP 9606 X:132369317-132961395
GeneTranscriptPositionBiotype
ENSG00000171004 (HS6ST2)
heparan sulfate 6-O-sulfotransferase 2 		ENST00000370833 (HS6ST2-201) 132628223-132958602 protein_coding
ENST00000370836 (HS6ST2-002) 132626016-132961395 protein_coding
ENST00000406696 (HS6ST2-202) 132628223-132958602 protein_coding
ENST00000521489 (HS6ST2-004) 132627970-132961395 protein_coding
ENST00000602570 (HS6ST2-005) 132735084-132758332 processed_transcript
ENSG00000227064 (RP3-363L9.1)
 ENST00000428456 (RP3-363L9.1-001) 132907279-132907575 processed_pseudogene
ENSG00000235849 (HS6ST2-AS1)
HS6ST2 antisense RNA 1 		ENST00000455269 (HS6ST2-AS1-001) 132667642-132669888 antisense
CIL_0000T0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036109-ENSMUSG00000062184 CGP 10090 X:51117269-51681856
GeneTranscriptPositionBiotype
ENSMUSG00000036109 (Mbnl3)
muscleblind-like 3 (Drosophila) 		ENSMUST00000041495 (Mbnl3-003) 51120080-51146415 protein_coding
ENSMUST00000114875 (Mbnl3-002) 51117269-51205832 protein_coding
ENSMUST00000114876 (Mbnl3-001) 51120080-51205990 protein_coding
ENSMUST00000136404 (Mbnl3-006) 51120489-51164674 protein_coding
ENSMUST00000148116 (Mbnl3-005) 51120885-51139366 processed_transcript
ENSMUST00000150014 (Mbnl3-004) 51120452-51127370 retained_intron
ENSMUST00000156028 (Mbnl3-007) 51164417-51206532 processed_transcript
ENSMUSG00000062184 (Hs6st2)
heparan sulfate 6-O-sulfotransferase 2 		ENSMUST00000088172 (Hs6st2-001) 51387212-51681703 protein_coding
ENSMUST00000114871 (Hs6st2-002) 51387212-51681856 protein_coding
ENSMUST00000140145 (Hs6st2-004) 51680178-51681086 processed_transcript
ENSMUST00000142738 (Hs6st2-003) 51676783-51681348 retained_intron
ENSMUST00000142983 (Hs6st2-005) 51679992-51680565 processed_transcript
ENSMUSG00000081188 (Gm14621)
predicted gene 14621 		ENSMUST00000117709 (Gm14621-001) 51238844-51239532 processed_pseudogene
ENSMUSG00000081350 (Gm5388)
predicted gene 5388 		ENSMUST00000120059 (Gm5388-001) 51218877-51219993 processed_pseudogene
ENSMUSG00000082950 (Gm7834)
predicted gene 7834 		ENSMUST00000117560 (Gm7834-001) 51212511-51212947 processed_pseudogene
ENSMUSG00000082968 (Gm14581)
predicted gene 14581 		ENSMUST00000121726 (Gm14581-001) 51629490-51629687 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000T0_0001ENSG00000171004ENST00000370833ENST00000370836ENST00000406696ENST00000521489ENST00000602570ENSG00000227064ENST00000428456ENSG00000235849ENST00000455269CIL_0000T0_0002ENSMUSG00000036109ENSMUST00000041495ENSMUST00000114875ENSMUST00000114876ENSMUST00000136404ENSMUST00000148116ENSMUST00000150014ENSMUST00000156028ENSMUSG00000062184ENSMUST00000088172ENSMUST00000114871ENSMUST00000140145ENSMUST00000142738ENSMUST00000142983ENSMUSG00000081188ENSMUST00000117709ENSMUSG00000081350ENSMUST00000120059ENSMUSG00000082950ENSMUST00000117560ENSMUSG00000082968ENSMUST00000121726
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000T0_0001ENSG00000171004ENST00000370833ENST00000370836ENST00000406696ENST00000602570ENSG00000227064ENST00000428456ENSG00000235849ENST00000455269CIL_0000T0_0002ENSMUSG00000036109ENSMUST00000041495ENSMUST00000114875ENSMUST00000114876ENSMUST00000136404ENSMUST00000148116ENSMUST00000150014ENSMUST00000156028ENSMUSG00000062184ENSMUST00000088172ENSMUST00000114871ENSMUST00000140145ENSMUST00000142738ENSMUST00000142983ENSMUSG00000081188ENSMUST00000117709ENSMUSG00000081350ENSMUST00000120059ENSMUSG00000082950ENSMUST00000117560ENSMUSG00000082968ENSMUST00000121726
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171004 ENST00000370833 N/A N/A N/A 1.734±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370836 0.049±0.00 0.140±0.00 0.823±0.00 N/A 0.116±0.11 0.092±0.01 0.084±0.06 8.065±0.00 0.112±0.00 0.271±0.25 0.035±0.00 1.770±0.00 2.062±0.39 1.026±0.00
ENST00000406696 N/A N/A 1.769±0.00 N/A N/A 0.098±0.02 0.138±0.00 N/A 0.346±0.00 N/A 0.147±0.07 2.399±0.94 8.503±0.00 0.772±0.00
ENST00000521489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00
ENSG00000227064 ENST00000428456 N/A N/A N/A N/A N/A N/A 1.363±0.00 0.203±0.00 N/A N/A N/A 0.132±0.00 N/A N/A
ENSG00000235849 ENST00000455269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 0.019±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036109 ENSMUST00000041495 0.936±0.33 0.237±0.13 N/A N/A 1.940±0.25 1.519±0.84 0.187±0.05 0.220±0.08 0.117±0.06 1.300±0.93 N/A 0.935±0.41 32.216±6.23 0.537±0.09
ENSMUST00000114875 0.529±0.08 0.190±0.12 N/A N/A 0.620±0.21 0.885±0.28 0.033±0.01 0.133±0.02 0.053±0.03 0.772±0.19 0.015±0.01 0.795±0.35 N/A 0.169±0.00
ENSMUST00000114876 0.496±0.23 0.242±0.00 N/A 0.263±0.00 0.921±0.89 1.520±0.59 N/A 0.128±0.07 0.088±0.00 1.115±0.36 N/A 0.916±0.45 8.033±0.00 1.360±0.29
ENSMUST00000136404 N/A 0.115±0.02 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A
ENSMUST00000148116 N/A N/A N/A N/A 1.752±0.00 N/A 0.120±0.00 0.174±0.00 0.103±0.02 N/A 0.072±0.03 0.837±0.34 N/A 0.601±0.00
ENSMUST00000150014 N/A 0.060±0.00 N/A N/A 0.236±0.05 0.382±0.00 0.015±0.00 0.070±0.02 0.043±0.02 0.275±0.00 0.009±0.00 0.304±0.10 N/A N/A
ENSMUST00000156028 N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.00 N/A 0.181±0.00 N/A N/A N/A
ENSMUSG00000062184 ENSMUST00000088172 0.070±0.04 0.977±0.56 0.053±0.01 4.471±0.74 0.126±0.06 N/A 0.026±0.02 0.226±0.07 0.118±0.05 0.186±0.00 0.284±0.15 0.941±0.25 N/A 0.164±0.06
ENSMUST00000114871 N/A 2.412±0.42 0.024±0.00 N/A 0.095±0.05 N/A 0.060±0.02 0.534±0.09 0.175±0.11 0.615±0.12 N/A 3.263±0.95 0.647±0.10 0.101±0.02
ENSMUST00000140145 N/A N/A N/A N/A N/A N/A N/A 1.467±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000142738 0.027±0.00 N/A N/A N/A 0.031±0.00 N/A 0.015±0.00 N/A 0.039±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142983 0.228±0.00 3.199±0.36 N/A N/A 0.222±0.06 N/A 0.445±0.24 1.022±0.00 N/A 1.233±0.27 N/A 3.905±0.00 N/A 0.424±0.22
ENSMUSG00000081188 ENSMUST00000117709 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.13 0.586±0.52 N/A
ENSMUSG00000081350 ENSMUST00000120059 0.049±0.02 N/A 0.057±0.00 0.045±0.05 0.070±0.06 0.061±0.02 0.026±0.00 0.041±0.02 0.015±0.01 0.032±0.00 N/A 0.101±0.03 0.210±0.16 0.075±0.04
ENSMUSG00000082950 ENSMUST00000117560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00
ENSMUSG00000082968 ENSMUST00000121726 N/A N/A N/A 0.731±0.35 N/A N/A N/A N/A 0.681±0.00 N/A N/A N/A N/A 2.418±0.00

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